| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3546 |
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| Symbol | hemA1 |
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| ID | 5713777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3728081 |
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| End bp | 3729295 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269475 |
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| Product | 5-aminolevulinate synthase |
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| Protein accession | YP_001534880 |
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| Protein GI | 159046086 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.676402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTTG ACGCCCTTTT TGCCACCCAG CTGAACCAGC TGAAAGAGGA AGGCAATTAT
CGCATTTTCG CAGAGCTCGA GCGCGAATGC GGCCAACACC CCAAGGCGCA GTGCCATGGC
GAAGACGGCA AGCGACAGAT CACCGTTTGG TGCTCGAACG ACTATCTCGG CATGGGCCAG
CACCCCAAGG TGGTGGAACG CATGCAAGAG GTGATCGGCC AGTGCGGCGC GGGCGCGGGC
GGCACCCGCA ACATCTCCGG CACGAACCAC CATCACCGGC TCCTCGAAGA CGAGTTGGCG
GATCTGCACG GCAAGGAAGA CGCGCTGCTG TTCACCTCCG GCTACGTGTC GAACTGGGCC
GCGCTCAGCA CCCTCGGCGC CCGGCTGCGC GACTGCGTGA TTCTCTCCGA TGAACTCAAC
CACGCCTCGA TGATCGAAGG CATGCGCCAC TCCCGCGCCA AGGTCGTCAT CTGGAAACAC
AACGACCCCG CCGATCTCGA GGCCAAGCTC GCGGCCCTGC CCGCCAACTG CCCCAAGATC
GTCGCGTTCG AGAGCGTCTA TTCCATGGAT GGCGACATCG CGCCCATCGC CGAGATCTGC
GACGTGGCCG AGAAATACGG CGCCATGACC TATCTCGACG AGGTGCACGC CGTGGGCATG
TACGGCCCCC GCGGGGCGGG CATCGCCGAA CGGGACGGCG TGATGGACCG CGTCACCCTG
ATCGAGGGCA CGCTGGGCAA GGCTTTCGGC GTGGTCGGTG GCTACATCAC CGGCAGCAAG
ACACTCTGCG ACTTCATCCG CTCCTTCGCG TCGGGCTTCA TCTTCACCAC CGCCCTGCCC
CCGGCGGTCG CGGCCGCGGC GCAAACCTCG ATCCGGCACC TGAAGGAAAG CAGCGCCGAG
CGCGACCTGC AAAAGGTCCG CGTCGCCCAG CTGCGCCAGA TGCTCGACCG CGCCGGCATC
CCGCATATCG ACAACCCGAG CCACATCATC CCGGTGATGA TCAAGGACCC GGTGAAATGC
CGGATGCTGT CGGATTACCT GATGGACGAG TTCGGCATCT ACGTGCAGCC GATCAATTAC
CCCACCGTGC CCAAGGGGAC CGAGCGTCTG CGCTTCACGC CCTCGCCGAA TCATTCGGTG
GACGACCTGC GCCACCTGGT CTCCGCGCTG GAGGTTTTGT GGAAGCAATG CGCGATCTCC
CAGGCGGTGG CGTAA
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| Protein sequence | MDFDALFATQ LNQLKEEGNY RIFAELEREC GQHPKAQCHG EDGKRQITVW CSNDYLGMGQ
HPKVVERMQE VIGQCGAGAG GTRNISGTNH HHRLLEDELA DLHGKEDALL FTSGYVSNWA
ALSTLGARLR DCVILSDELN HASMIEGMRH SRAKVVIWKH NDPADLEAKL AALPANCPKI
VAFESVYSMD GDIAPIAEIC DVAEKYGAMT YLDEVHAVGM YGPRGAGIAE RDGVMDRVTL
IEGTLGKAFG VVGGYITGSK TLCDFIRSFA SGFIFTTALP PAVAAAAQTS IRHLKESSAE
RDLQKVRVAQ LRQMLDRAGI PHIDNPSHII PVMIKDPVKC RMLSDYLMDE FGIYVQPINY
PTVPKGTERL RFTPSPNHSV DDLRHLVSAL EVLWKQCAIS QAVA
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