Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3529 |
Symbol | pucC2 |
ID | 5713760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3708748 |
End bp | 3710049 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641269458 |
Product | PUCC protein |
Protein accession | YP_001534863 |
Protein GI | 159046069 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.513682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGGCT GGCTGTCGAT CTTCCGGATG GGGCTGGTGC AGCTCTGTCT CGGGGCGGTG GTGGTCCTGA CGACATCGAC CCTGAACCGG CTGATGGTGG TCGAACTGGC CCTGCCCGCG GTCCTGCCCG GCCTGCTCGT GGGCCTGCAT TACGCGATCC AGTTGAGCCG ACCCCATTGG GGCTACAAGT CTGACACGGG CGGCAAGCGC ACGCGCTGGA TCATCGGCGG GATGGCGGTG CTGTCCTCCG GCGCGATGCT GGCGGCTTAT GGCGTGGTGC TGATGGAGGC TGCATTCCTG CCCGGATTGC TGGCCTCGAT CCTGGCCTAC ACGCTGATCG GCGTGGGCGT GGGCGCGTCG GGCACGTCCT TGCTCGCCCT GCTCGCAACC GCGACCCATC CGCGCCGGCG CGCCGCGGCG GCCACGATCA CCTGGCTGAT GATGATCGCG GGCATTGCGG TGACCGCGGG CACTGTGGGC AGCTTCCTCG ACCCCTATTC CCCGGCCCTG TTGCTGAAAA TCGTGGCCAT CGTCACCCTG GGCGCGGTCG TTCTTACCAC TGTCGCAGTC TGGGGCATCG AGCGGCGGAT CACCGTCACC GCCCCGCGGG AGACCGCCCT GCCCTTCCTC GACGGGCTGC GGGAAGTGTG GTCCGAGCGC AAGGCGCGCA ATTTCACCAT TTTCATCTTC CTGTCCATGA CCGCCTATTT CATGCAGGAG CTGATCCTCG AACCTTACGC AGGCCTCGTC TTCGCCTTCA CGCCGGGGCA GTCCACGTCC CTCAGCGGGG CGCAGAATGG CGGCGTGTTC CTGGGCATGG TGCTGGTGGG CGTCTGCGCC ACGGGCCTGC GCTGGGGATC GCTGAAATTC TGGGTGATCG CGGGCTGCAT CGGCTCGGCC GCGGCGCTGG CGCTGATCAC CGCGCTGGGA CAGGTGGGGC CGACCGCCCC GCTGGTACCC GCGGTCGTGT TCCTGGGCTT TGCCAACGGC ACCTTCGCCG TGGCCGCCAT CGGCGCGATG ATGCAGCTGG CCGGCGAGGG CCGCGAGGCG CGCGAGGGGA CCCGCATGGG TCTCTGGGGG GCCGCGCAGG CCATTGCCGC GGGGTTCGGC GGGCTCGTGG GGGCGGCCAG TGCCGACCTG CTGCGCGCCG TGACCGCCAC GGATGCCGAC GCGTTCGGCG CCGTCTTTGT TTTCGAAGCC GCCCTCTTCC TCGTTGCGGG CCTGATGGCC TGGCACGTGG TGGATGGCGT GCGACAGTCG CGCACCGCTC GGACCGACGG TGCCTTGGTT CCCGGAGAAT GA
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Protein sequence | MLGWLSIFRM GLVQLCLGAV VVLTTSTLNR LMVVELALPA VLPGLLVGLH YAIQLSRPHW GYKSDTGGKR TRWIIGGMAV LSSGAMLAAY GVVLMEAAFL PGLLASILAY TLIGVGVGAS GTSLLALLAT ATHPRRRAAA ATITWLMMIA GIAVTAGTVG SFLDPYSPAL LLKIVAIVTL GAVVLTTVAV WGIERRITVT APRETALPFL DGLREVWSER KARNFTIFIF LSMTAYFMQE LILEPYAGLV FAFTPGQSTS LSGAQNGGVF LGMVLVGVCA TGLRWGSLKF WVIAGCIGSA AALALITALG QVGPTAPLVP AVVFLGFANG TFAVAAIGAM MQLAGEGREA REGTRMGLWG AAQAIAAGFG GLVGAASADL LRAVTATDAD AFGAVFVFEA ALFLVAGLMA WHVVDGVRQS RTARTDGALV PGE
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