| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3509 |
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| Symbol | crtB |
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| ID | 5713740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3689348 |
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| End bp | 3690433 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269438 |
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| Product | phytoene synthase |
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| Protein accession | YP_001534843 |
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| Protein GI | 159046049 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCG ACGCCGCGCC TTTCGCCCCG ACCGCGCTGG CCTATACCCA GGCCGATCTC
GACCACTGCA AGGAGGCGAT TCGCCACGGC TCCCTGTCGT TCCACGCGGC CTCCCGGCTT
CTGCCGAACC GGGTGCGCGA CCCGGCGCTG GCGCTCTATG CCTTCTGCCG CCTGGCCGAC
GACGCGGTGG ATCTGCACCA TGAAAAGCCC GCCGCCGTGC TCGATCTGCG CGACCGGCTG
GACCTGGCCT ATCGCGGCCA GCCCCGCAAC GCGCCCGCCG ACCGGGCCTT CACTGCGATG
ATCGAGGCCC ATGACATGCC CCGCGCCCTG CCCGAGGCCC TGATCGAGGG CTTCGCCTGG
GACGCGATCG AACGGCAATA CGATACCCTG TCGGATGTGC GGGCCTATTC CGCGCGCGTC
GCCGCCGCCG TCGGAGCGAT GATGACCGTG CTCATGGGGG TGCGCGATGC CGATGCGCTG
GCCCGCGCCT GTGATCTGGG CGTGGCGATG CAGCTGACCA ATATCTGCCG CGACGTGGGC
GAGGACGCCG CCGAAGGCCG CCTGTATCTG CCCCGCGCCA TGATGGCCGA GGAAGGGCTC
GACCCGGAGG CCTTTCTCGC CGACCCGCGC CCGTCCGAGG CGCTGACCAC CGTCACCCGC
CGCCTGCTGG CCGAAGCGAC CCGGCTCTAT TACCGTTCCG AGGCGGGGAT CGCGGCCCTG
CCGCGCGCCG CCCGTCCCGG CATCTTCGCC GCGCGCCATA TCTATGCCGG GATCGGCAAT
GAAGTGACCC GCGCCGCGTT CGACAACATC ACCCGCCGCG CCCATACCAG CGCCGGGCAG
AAACTCGGCT GGATCGGCCT GTCGGTCCTG CGCACGGGGG TCAGCATGGT CATGCCGCGC
TCCGCCGTCC TTCACGCCGA CCCGCTGCCC GAAACCGCCT TCCTGGTCGA GGCCGGCGCC
CGTATCGCGG ACCGCTCCGC CTGGGGCGCG GGGCGCTCCG GCAACCTGCT TGGCCTCTTC
GCGCAGCTCG AAGCCCGCGA CCGCGAGACC CGCGGTATGG AACCTTACGG AGGCCGCCCT
ACTTAA
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| Protein sequence | MSLDAAPFAP TALAYTQADL DHCKEAIRHG SLSFHAASRL LPNRVRDPAL ALYAFCRLAD
DAVDLHHEKP AAVLDLRDRL DLAYRGQPRN APADRAFTAM IEAHDMPRAL PEALIEGFAW
DAIERQYDTL SDVRAYSARV AAAVGAMMTV LMGVRDADAL ARACDLGVAM QLTNICRDVG
EDAAEGRLYL PRAMMAEEGL DPEAFLADPR PSEALTTVTR RLLAEATRLY YRSEAGIAAL
PRAARPGIFA ARHIYAGIGN EVTRAAFDNI TRRAHTSAGQ KLGWIGLSVL RTGVSMVMPR
SAVLHADPLP ETAFLVEAGA RIADRSAWGA GRSGNLLGLF AQLEARDRET RGMEPYGGRP
T
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