Gene Dshi_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3505 
Symbol 
ID5713736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3686122 
End bp3686574 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content68% 
IMG OID641269434 
Producttranscriptional regulator 
Protein accessionYP_001534839 
Protein GI159046045 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.54422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG TCAATGACGC CCTTGCGATT TCCCTTCTGT CGGAACTGAT CACCACCGAT 
CAGCTGGCCC GCGCGCGGCT GTCCAAGGCC CTGCCGAAGG GGATGGAGCT GAGCCATTTC
TCGGTGCTGA ACCATCTGGC GAACACCTCG GCCGAGCGGA CCCCGGCACA GCTGGCGCGG
AGTTTCCACG TCACCAAGGG GGCGATGACC AACACGCTGG GCAAGCTGGA GGCGGCGGGG
CATGTGCATA TCCGGCCCGA CTGGGACGAT GCGCGGCGCA AGCTGGTGGC GGTCAGCCCG
GCGGGGCGGG CGGCGCGGGA TGCGGCCTTG CAGGTGATCA CGCCGATCAT CGCCGAGATG
ACCTCCAGCC TGGGGGCGGA GAAGGTGCGC GCGGTCTTGC CGATCCTGCG GGAGTTGCGG
GTGCGGCTGG AGCAGGACGA CACCAAGCCC TAG
 
Protein sequence
MNTVNDALAI SLLSELITTD QLARARLSKA LPKGMELSHF SVLNHLANTS AERTPAQLAR 
SFHVTKGAMT NTLGKLEAAG HVHIRPDWDD ARRKLVAVSP AGRAARDAAL QVITPIIAEM
TSSLGAEKVR AVLPILRELR VRLEQDDTKP