| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3503 |
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| Symbol | bchD |
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| ID | 5713734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3683499 |
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| End bp | 3685220 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641269432 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_001534837 |
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| Protein GI | 159046043 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.457147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.553977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCCGC CCACCCATAT GGACCCGGTC GAACGCTGGG CCCAGGCGGC CACCGCCGCC
GCCCTGCTGG CCATCGACCC CGAGGGGCTC GGCGGGCTGT GGCTCCGCGC GCGCTCAGGC
CCGGCGCGCG ACCGGCTGCT CGCGGGCCTG CGCGGGCTGC TCACCGCCCC GCGCCGCATG
CCCCCCGGCA TCGCCGACGC GCAGCTTTTC GGCGGCGTGG ACCTCGCCGC GACCCTGTCT
GCGGGCCAAC TCGTGCGCGC CCCCGGCCTG CTCGGCAGCG GCCCCGTCGC CCTGATCGCC
CCCATGGCGG AACGGATGAC GCCGGGCCTT GCCGCCCGCC TCGCCCAAAC CCTCGATGCA
TCCCAGGGCC ATTGCCTCAT CGCCCTGGAC GAAGGGGCCG AGCCCGACGA ACGCCTCGCC
GCCTCTCTCG CCGACAGGCT CGCGCTGCAT ATCGACCTCG ACGGGCTGGC GCTGGCCGAC
TGCCCGCCCC CCGCCTTCGA CGCGGAGGAG ATCGCCCGCG CGCGCACCTA CCTGCCCCAT
GTGCGCCTCG GCCCTGACGC CCATGCCGCC CTCACCGTCG CCGCCCTGCG CCTCGGCATC
GACAGCCTGC GCGCCCCCCT GCTCGCGGCC CGCGCCGCCC GGGCGCTTGC CGCGCTCGAT
GGCCGCGACA CCGCGGACGA GGACGACCTC GTGACCGCCA CGGAACTGGT GCTCGCCCCC
CGCGCGACCC GTTTCCCCGA GGAGGACACC GACGAGGCCG AGCCGCCCCA GGACGCCCCC
GAACCCCCGC CCGAAACCGA CGCCGCGCCC GAGGACGAAC TGGACGAGAC CGACCCGCCC
CAGCGCCTGC CGGAAGAGAT CCTGCTGCAG GCCGCCAAGG CCGTCCTGCC GCCGGACCTG
CTGGCCAGGC TTGCCGCCGC GAAGGCCCCT AAGACCGCCA AATCCGGGGC CGGGGCCGGG
GCCGCGAAGA AAGGCAACCG CCGGGGCCGC CCCCTGCCGT CCCGCCCGGG CCGGATCGAC
GGGCAGTCCC GCATCGACCT CGTCGCCACC CTGCGCGCCG CAGCACCCTG GCAGACCATC
CGCCGCAAGC TGACCCCCGA CGCCCCGCAA AAGGTGCTGG TCCGGTCCGA GGATATCCGC
CTGCGCCGGT TCGAGGAAAA ATCCGACCGC CTGCTGATCT TCGCCGTGGA CGCCTCCGGC
TCCGCTGCCC TTGCGCGCCT GGCCGAGGCC AAGGGCGCGG TCGAGCTGAT GCTGGCGGAG
GCTTACGCGC GCCGCGACCA CGTCGCCCTC ATCGCCTTCC GGGGCACCGG CGCGGACCTT
CTGCTGCCGC CGACCCGGTC GCTGGTCCAG ACCAAGCGCC GCCTCGCCGC GCTTCCCGGC
GGGGGCGGCA CACCGCTCGC CGCGGGCCTG CGCGCCTCGC TGGACCTCGC CGCACTCAGC
AAGGGTCGCG GCCTCAGCCC CACCATCGCG CTCCTGACCG ACGGGCGGGC CAATATCGCG
CTCGACGGCA CCGCCAACCG GCCTGCCGCC GCCGAGGACG CCCGCGCCAT GGCCCGCGCC
CTGCGCGCCC AGGCGACACC CTCAATCGTC ATCGACATGG GCAACCGGCC CCAGGCGCAG
CTGCGCGATC TCGCGGGCGA TCTGGCCGCC CCCTACATCC CCATGCCCCG CGCCGACAGC
CAGCGTCTCT CCACCGCGGT GACTGCGGCG CTCGACTCAT GA
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| Protein sequence | MIPPTHMDPV ERWAQAATAA ALLAIDPEGL GGLWLRARSG PARDRLLAGL RGLLTAPRRM
PPGIADAQLF GGVDLAATLS AGQLVRAPGL LGSGPVALIA PMAERMTPGL AARLAQTLDA
SQGHCLIALD EGAEPDERLA ASLADRLALH IDLDGLALAD CPPPAFDAEE IARARTYLPH
VRLGPDAHAA LTVAALRLGI DSLRAPLLAA RAARALAALD GRDTADEDDL VTATELVLAP
RATRFPEEDT DEAEPPQDAP EPPPETDAAP EDELDETDPP QRLPEEILLQ AAKAVLPPDL
LARLAAAKAP KTAKSGAGAG AAKKGNRRGR PLPSRPGRID GQSRIDLVAT LRAAAPWQTI
RRKLTPDAPQ KVLVRSEDIR LRRFEEKSDR LLIFAVDASG SAALARLAEA KGAVELMLAE
AYARRDHVAL IAFRGTGADL LLPPTRSLVQ TKRRLAALPG GGGTPLAAGL RASLDLAALS
KGRGLSPTIA LLTDGRANIA LDGTANRPAA AEDARAMARA LRAQATPSIV IDMGNRPQAQ
LRDLAGDLAA PYIPMPRADS QRLSTAVTAA LDS
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