| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3490 |
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| Symbol | |
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| ID | 5713721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3670604 |
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| End bp | 3672448 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641269419 |
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| Product | ATPase |
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| Protein accession | YP_001534824 |
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| Protein GI | 159046030 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGCT TTTTCGAACG TCTCGTGGAC CCCTATGTGG CGTACCCCGA GACGGATTGC
CCACCCACGC GCCTCTGGCC CTTCATGCTT TCCTGGTCGC GCCCGTTTCG CGGCCTCTTT
GTCGTGGCCG GGGTCATGTC GCTGCTGGTG GCGGCGGTGG AGATCGCGCT GATCTACTAC
ATGGGCCGGG TGGTCGACCT GCTCTCGACC AGCAGCCCGG CAACCGTCTG GGCCGACCAC
GGCACCGAGC TGATCTTCGT GGCCCTGTTC ATCCTGCTCT TCCGGCCCGC GCTGCAGGCG
CTCGACGTGT TGCTCCTGAA CAACGCGATC CTGCCGAATT ACGGCACGCT CTTCCGGTGG
CGCGCTCATC GCCAGGTGCT GCGACAGTCG GTCGGCTGGT TCGAGAACGA CTTCGCCGGC
CGCATCGCCA ACCGGATCAT GCAGACCCCG CCCGCCGCGG GCGAGGCGGT GTTCCAGGTC
TTCGACGCGA TCAGCTTCGC GCTGGCTTAC CTGATCGGGG CGGCGATCCT GCTCGCCGGA
GCCGATCCGC GCCTCGCGAT CCCGCTGATC GTATGGTTCG TGCTCTACGG CGCGCTGGTG
CGCTGGACCA TCATCAACGT GGGCCCCGCC TCCAAGGCCA GCTCCGACGC CCGGTCCGAG
ACCACGGGCC GGGTGGTCGA TGCCTATACC AACATTCACG CGGTCAAGCT TTTCGCCCAT
CACGACCGGG AGCTCGCCTA CGCCAAGGAC GCGATCGAGA AGACCCGCAC CACCTTCGCC
CGCGAGATGC GGATCTTCAC CACCATGGAC ATTGTTCTGG TGATCCTGAA CGGCCTGCTT
ATCGTCGGCG TGGTCGGCTG GGCGATCCTG ATGTGGGTGC AAGGCACGGC CTCGGTCGGC
GTGGTGGCCG CCGCGACCGC CCTGACCCTG CGGCTGAATG CCATGACCGG CTGGATCATG
TGGGCGGTCT CGACCTTCTT CCAGAACCTC GGCGTGATCG CCGAAGGGAT GGAAACCATC
GCCCAACCCA TCACCCTCGT GGATGCACCG AACGCCGGGC CCCTGTCCCT GACAAAGGGC
GAGATCACCC TCGACCGGCT CAGCCACCAT TACGGGCAGG GCGCAGGCGG GCTCGATGCC
ATTTCCCTGA CCCTGAAACC CGGGGAAAAG GTCGGCCTCG TGGGCCGCTC CGGCGCCGGA
AAATCGACCC TCGTCAAGCT GCTCTTGCGG TTCTACGACC CCGATGGGGG CCGCGTTCTG
ATCGACGGGC AGGACATCGC CACCGTCACC CAGGACAGCC TGCGCGCCCG GATCGGCATG
GTGCAGCAGG ACAGCGCGCT CCTGCACCGC TCTGTCCGGG ACAACATCCT CTATGGCCGC
CCCGAGGCGA CCGAGGCCGA GATGATCGCC GCCGCCAAGC GCGCCGAGGC CCATGACTTC
ATCCAGACCC TGCGCGACCC CCAGGGCCGC ACCGGTTACG ACGCCCATGT GGGCGAACGG
GGCGTGAAGC TGTCCGGCGG GCAGCGGCAG CGGATCACGC TCGCCCGCGT CATCCTCAAG
GACGCGCCGA TCCTGATCCT GGACGAAGCC ACCTCCGCAC TCGACAGCGA GGTGGAAGCC
GCCATCCAGA ACACGCTCTA CGGCGTGATG GAGGGCAAGA CCGTCATCGC CATCGCCCAC
CGCCTGTCCA CCATCGCGCA GATGGACCGC ATTCTCGTGC TTGACGAGGG CCGCGTCATT
GAGGACGGCA CCCATGCCGG GCTGCTCGCG GCGGGCGGGC TATATGCAAG CTTCTGGGCC
CGCCAATCCG GCGGGTTCAT CAACACGGCG GAGGCCGCGG AATGA
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| Protein sequence | MFRFFERLVD PYVAYPETDC PPTRLWPFML SWSRPFRGLF VVAGVMSLLV AAVEIALIYY
MGRVVDLLST SSPATVWADH GTELIFVALF ILLFRPALQA LDVLLLNNAI LPNYGTLFRW
RAHRQVLRQS VGWFENDFAG RIANRIMQTP PAAGEAVFQV FDAISFALAY LIGAAILLAG
ADPRLAIPLI VWFVLYGALV RWTIINVGPA SKASSDARSE TTGRVVDAYT NIHAVKLFAH
HDRELAYAKD AIEKTRTTFA REMRIFTTMD IVLVILNGLL IVGVVGWAIL MWVQGTASVG
VVAAATALTL RLNAMTGWIM WAVSTFFQNL GVIAEGMETI AQPITLVDAP NAGPLSLTKG
EITLDRLSHH YGQGAGGLDA ISLTLKPGEK VGLVGRSGAG KSTLVKLLLR FYDPDGGRVL
IDGQDIATVT QDSLRARIGM VQQDSALLHR SVRDNILYGR PEATEAEMIA AAKRAEAHDF
IQTLRDPQGR TGYDAHVGER GVKLSGGQRQ RITLARVILK DAPILILDEA TSALDSEVEA
AIQNTLYGVM EGKTVIAIAH RLSTIAQMDR ILVLDEGRVI EDGTHAGLLA AGGLYASFWA
RQSGGFINTA EAAE
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