Gene Dshi_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3459 
Symbol 
ID5712517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3641075 
End bp3641428 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content56% 
IMG OID641269388 
Productprotein of unknown function DUF454 transmembrane 
Protein accessionYP_001534793 
Protein GI159045999 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCTA TTTGGGTGAT CTCGGGCAGC ACAGCGCTTG GCATGGGCGT GATCGGCATT 
GCCTTGCCAC TTCTGCCGAC TGTACCCTTC CTGCTCCTTG CTGCCTTCTG TTATGCACGA
GGATCTGATC GCCTTCACGC CTGGCTTCTG GATCATCCAA GATTGGGTGC CCCCATTCTG
GGCTGGCAGG AACGGGGCTC TATCAGCTTG CGTGCCAAAG GTTTAGCCTC ACTTTCGATC
CTTGGGGCCT TTTCACTCTC ACTTGTACTT GGCGTCTCAA CCACAGTTCT GACCGTCCAG
GCAGCCGTAC TCAGCATCGT GGCCGTATTT ATCTGGACGC GTCCGAGCAG CTAG
 
Protein sequence
MRAIWVISGS TALGMGVIGI ALPLLPTVPF LLLAAFCYAR GSDRLHAWLL DHPRLGAPIL 
GWQERGSISL RAKGLASLSI LGAFSLSLVL GVSTTVLTVQ AAVLSIVAVF IWTRPSS