| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3430 |
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| Symbol | regA |
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| ID | 5712488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3610863 |
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| End bp | 3611417 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269359 |
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| Product | photosynthetic apparatus regulatory protein RegA |
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| Protein accession | YP_001534764 |
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| Protein GI | 159045970 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGAGC AACCCGCACG CGATATCGGC CCGGATGCAT CACTGCTCCT TGTGGATGAC
GATGAACCGT TTCTGCGCCG CCTTGCGCGC GCCATGGAAA AGCGCGGCTT CGAGCCGGAA
ATGGCGGGAT CCGTGGCGGC TGGGAAGGCC ATCGCAACCG CCCGCCCGCC CGCCTACGCC
GTGGTTGACC TGCGATTGGA TGATGGAAAT GGTCTCGATG TGGTCGAGGT ACTTCGCGAA
AGGCGCCCCG ATGCGCGAAT TGTTGTTCTG ACCGGTTATG GGGCGATTGC GACTGCAGTG
GCGGCCGTGA AGATCGGAGC GACGGACTAC CTGTCCAAGC CCGCCGACGC CAATGACATC
ACGGCGGCCT TGCTCGCCCG TCCCGACGAG TTGCCGCCGC CGCCGGAGAA CCCCATGAGT
GCCGACCGGG TGCGGTGGGA GCATATTCAG CGGGTCTATG AATTGTGCGA CCGAAACGTT
TCCGAAACGG CGCGTCGGCT CAACATGCAT CGCCGGACAC TGCAACGTAT CCTGGCAAAG
CGATCCCCGC GCTGA
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| Protein sequence | MTEQPARDIG PDASLLLVDD DEPFLRRLAR AMEKRGFEPE MAGSVAAGKA IATARPPAYA
VVDLRLDDGN GLDVVEVLRE RRPDARIVVL TGYGAIATAV AAVKIGATDY LSKPADANDI
TAALLARPDE LPPPPENPMS ADRVRWEHIQ RVYELCDRNV SETARRLNMH RRTLQRILAK
RSPR
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