Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3406 |
Symbol | |
ID | 5712464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3584144 |
End bp | 3584692 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641269335 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001534740 |
Protein GI | 159045946 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.326874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCGA AAAGACAGTT TCTCACCATG GGTCTTGCGA CCCTGGCCAC ACCGGCCATT GCGCAACGTA AGTTCCAACT CGATCCGCGC TTTGAACCCA CCGTCGTCCC ACTTCGTTAC CCTTTTCAGG CTGGGCAAAT CATCGTCGTA CCACAGGCGC ATTATCTCTA TTGGGTGCAA CCCGAACAGA AGGCCCTGCG CTATGGCGTC GGCGTGGGCA AGGCAGGGCT CGAGTTCAAG GGCAATGCCA CGATCAAGCG CAAGGCGGTC TGGCCCAACT GGCGACCCAC CGACGAGATG ATCGAACGGG AACCGCACAA GTACGAACGG TTCGCTGATG GGGTCCCGGG AGGGCCGAAC AACCCGCTGG GCGCACGAGC GCTGTATCTT TATCAAGGCA ACGTGGACAC CTACTTCCGC ATCCACGGGA CGACAGAGCC TTGGTCGATC GGGCGATCGG TCTCAAACGG CTGTATCCGC ATGGTCAACG AGCATGTCAT AGACCTCTAT GACCGGGTTC CACGCGGCAC GCTCGTTACC GTTCTCTGA
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Protein sequence | MISKRQFLTM GLATLATPAI AQRKFQLDPR FEPTVVPLRY PFQAGQIIVV PQAHYLYWVQ PEQKALRYGV GVGKAGLEFK GNATIKRKAV WPNWRPTDEM IEREPHKYER FADGVPGGPN NPLGARALYL YQGNVDTYFR IHGTTEPWSI GRSVSNGCIR MVNEHVIDLY DRVPRGTLVT VL
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