Gene Dshi_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3406 
Symbol 
ID5712464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3584144 
End bp3584692 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID641269335 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001534740 
Protein GI159045946 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.326874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGA AAAGACAGTT TCTCACCATG GGTCTTGCGA CCCTGGCCAC ACCGGCCATT 
GCGCAACGTA AGTTCCAACT CGATCCGCGC TTTGAACCCA CCGTCGTCCC ACTTCGTTAC
CCTTTTCAGG CTGGGCAAAT CATCGTCGTA CCACAGGCGC ATTATCTCTA TTGGGTGCAA
CCCGAACAGA AGGCCCTGCG CTATGGCGTC GGCGTGGGCA AGGCAGGGCT CGAGTTCAAG
GGCAATGCCA CGATCAAGCG CAAGGCGGTC TGGCCCAACT GGCGACCCAC CGACGAGATG
ATCGAACGGG AACCGCACAA GTACGAACGG TTCGCTGATG GGGTCCCGGG AGGGCCGAAC
AACCCGCTGG GCGCACGAGC GCTGTATCTT TATCAAGGCA ACGTGGACAC CTACTTCCGC
ATCCACGGGA CGACAGAGCC TTGGTCGATC GGGCGATCGG TCTCAAACGG CTGTATCCGC
ATGGTCAACG AGCATGTCAT AGACCTCTAT GACCGGGTTC CACGCGGCAC GCTCGTTACC
GTTCTCTGA
 
Protein sequence
MISKRQFLTM GLATLATPAI AQRKFQLDPR FEPTVVPLRY PFQAGQIIVV PQAHYLYWVQ 
PEQKALRYGV GVGKAGLEFK GNATIKRKAV WPNWRPTDEM IEREPHKYER FADGVPGGPN
NPLGARALYL YQGNVDTYFR IHGTTEPWSI GRSVSNGCIR MVNEHVIDLY DRVPRGTLVT
VL