Gene Dshi_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3371 
SymbolrpsT 
ID5712429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3543739 
End bp3544005 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content61% 
IMG OID641269300 
Product30S ribosomal protein S20 
Protein accessionYP_001534705 
Protein GI159045911 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACT CGCCTCAGGC AAAAAAGCGA GCGCGCCAGA ACGAGCGCCG CGCTGAAGTC 
AACAAAGCGC GCCGGTCGCG CATCCGTACA TTCCTGCGCA AGGTCGAGGA AGCGATCGCA
AGTGGTGACT CTTCCGCTGC TGCAGACGCT CTCCGCAGTG CGCAGCCTGA GCTGATGCGC
GGCGTGACCA AGGGTATTCT GCACAAGAAT ACTGCGTCCC GTAAGATGTC GCGTTTGTCC
AAGCGCGTGA AGGCCCTGAG CGCCTGA
 
Protein sequence
MANSPQAKKR ARQNERRAEV NKARRSRIRT FLRKVEEAIA SGDSSAAADA LRSAQPELMR 
GVTKGILHKN TASRKMSRLS KRVKALSA