Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3357 |
Symbol | |
ID | 5712415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3530385 |
End bp | 3531194 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269286 |
Product | integrase catalytic region |
Protein accession | YP_001534691 |
Protein GI | 159045897 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACACG TTGTGGAAGT CCACGGAGTG AGCCAGCGAC GGGCGGGCAA GGCACTGGCC GTGGATCGGT CGAGCGTGCG CTATCGCAGC GTGCGGCCTG ACGATGCCGA AGCGAGGGCC GCCATGAAGG CTGTCGCGGC CGAGAGGCGG CGGTTTGGCT ATCGCCGCAT CCACGTGATG CTGGAACGGC AGGGGATCAT GATGAACCTG AAGAAGCTCA GGCGGCTCTA TCGCGAGGAG AAGCTCCAAG TGCGCCGCCG GGGCGGCCGA AAGCGGGCTC TGGGGACACG CTGGCCGATG CTGGTGCCAG ATGCCCCCAA CCAGCACTGG AGCCTGGACT TCGTCAGCGA TGCGCTGACG GATGGCAGAC GGTTCCGCGT TCTGGCCGTG GTCGACGACT ACAGCCGGGA GTGCCTGGCC TTGGTGGCGG ACACGTCGCT CTCTGGCCTG CGCGTCGTGC GCGAGCTCGA TGCGTTGATG TTGCGCCGCG GCCAGCCTGC AATGGTGGTT TCGGACAATG GAACGGAACT GACCTCGGTG GCTGTCCTGA GCTGGTGCCA GCGCACGGGC ATCGAATGGC ACTACATCGC GCCAGGAAAG CCCATGCAGA ATGGCTTCGT CGAAAGCTTC AACGGACGCT TCCGGGACGA GCTTCTCAAC GAGTCGCTAT TCTCGTCTCT GGCCGATGCC CGCGAGCAGA TCCGGGCATG GCAGCACGAC TACAACCACC ATCGCCCTCA CTCAGGACTG GGGAACATTC CGCCCGTCGA GTTCGTGGCA AAGAAGGGGC TGGAAATGCG CGCCGCGTAG
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Protein sequence | MAHVVEVHGV SQRRAGKALA VDRSSVRYRS VRPDDAEARA AMKAVAAERR RFGYRRIHVM LERQGIMMNL KKLRRLYREE KLQVRRRGGR KRALGTRWPM LVPDAPNQHW SLDFVSDALT DGRRFRVLAV VDDYSRECLA LVADTSLSGL RVVRELDALM LRRGQPAMVV SDNGTELTSV AVLSWCQRTG IEWHYIAPGK PMQNGFVESF NGRFRDELLN ESLFSSLADA REQIRAWQHD YNHHRPHSGL GNIPPVEFVA KKGLEMRAA
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