| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3332 |
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| Symbol | |
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| ID | 5712390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3497022 |
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| End bp | 3499481 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269261 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | YP_001534666 |
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| Protein GI | 159045872 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCG CTGAAATCGA GAGCAAGCTC GCCGCCGAAC GGCGCGCAAG ACTGACCGCG
GAGCGCCTGC TCGCCCAAAA ACAAGAAGAG CTTTACGCCG CGAATCAAAA GCTCTCCCGG
CATGCATTCA CCCTATCCGA CCAGATCGTC GAGCAGCGCC ACGCCGCCGA AGAGCTGAAG
GACGAGAATT TCCAGGTCAG ATCGGACCTG CGGCGGGCGG AACAGCGGCT GTGGACCTCG
TTCGAGACGA TAGAGGATGG CTTCGCGGTG TTCGATGCCT CGCGGAGGCT GGTCCTCGCC
AACCCGGCCT ATGTGTCCAT CTTCGACGGG CTGGAGGATG TGGCGCCGGG CATCGGCTAT
GCAGAACTCC TGCGGCTCTG CGCCGAGGAG GGGATCATAG ATACCGAAGG GCTGAGTCGT
CAGGACTGGT GCGCGCAGAT GGAGATGCGC TGGAACGGAG CGCAGATCGA GCCTGCGGTG
GTGCGGCTCT GGAACGGGTT TTCCATCAAG CTGGTGGAGC GGCGCGGCGA GGACGGCGAC
ATCGTCAGCC TGTGCCTGAA CATCACCGAT ACCATCAAGC GCGAGCAGGA ACTGACCCTC
GCACGGACCC GGGCCGAGGC CGCCAATCGC GCGAAATCCG CCTTCCTCGC CAATATGAGC
CACGAGTTGC GCACCCCGAT GAACGGTGTG GTCGCCATGT CCGAGCTGCT CAACGAAAGC
GCGCTGGACG AGGAGCAGGC GCTTTACGTG GAGACGATCC GCAAATCGGG CGAAGCGCTT
CTGGTGATCA TCAACGATGT GCTCGACTAC TCCAAGATGG AAGCGGAGAA GCTGCAACTG
CATCCCGCGC CCTTCGACTT GGAACGGTTG ATGCATGATG TGGTGATGCT GACCAAGCCC
ACCGCACAGG AGAAGTCGGT GGACCTGATG CTCGACTACG ACATCTTCCT GCCGAGCCAT
TTCATCGGCG ACCAGGGGCG GTTGCGCCAG GTAATGACCA ACCTGCTAGG CAATGCGGTA
AAGTTCACCC TGGAGGGACA TGTGCTGATC CGGGTGATCG GGATGCCGCC GGAAGACGGC
ACGCAGGAGA TCATCGTCAG CATCGAGGAT ACCGGGATCG GCATCGCGCC GGAGATGATC
GATCACATCT TCGGCGAGTT CAACCAGGCC GAGGACGAAC GCAACCGCGC CTTCGAGGGC
ACGGGCCTGG GGTTGGCCAT CACCAAGCAA CTGATTGACC TGATGGGTGG CGAGATCTGG
GTGGATTCCG AGATCGGCGA AGGCTCTTGT TTTTCGTTCC GGATCGCCTT GCCACTGGAT
GCCGCAGACG GGGAGCCGCC CCTGTCGGTG TCGTCCGAGC TGCGCCGGGT GCTGATCGTG
GAGGAAGGCG AGTTGAACCG CTCGATCCTG GAGCGTCAAC TGGCACCCTT GGGCGTGTCC
GTGGCGCTCG CGACCTCGGC CGAGGAGGCG TTGAGTTATC TGGATGCCAA TCCGGATGTG
GACGCGGTGC TGACCGATCT GGTCATGCCC GGCCTGTCGG GCAGCGAACT GGCCCGCCGC
GTGCGGGATC GGGTGGGAGG GCCGCCGGTG ATCCTGCTCA GCTCGGCGAT GCTGGGGCAG
TTGACTGCAG AGGATCGCAA CCTGTTCGAG GTGACCTTGA ACAAGCCGGT GATGCGCGCC
GATCTTTATG CGGCGCTGAA TACCCTTGCC CAGCGGAACA AGGTGCTGAA GCTCACCGAT
CCGATCACCG AGGACGCAGG CCCTCCGGCC GGTGCGGAGG TGATCTCAAT GATCCCTGCT
TCTGCCCCGC CCGCCCTGGA CCCGGTGGTG GAGCCGGGGC CGTTCGTGTC GGCCCGCGCC
GCCAAGGTCG CCCGGGAGGC GACACCCGCA TCTTTCGTGT CGGCCAAAGC CACGCAGCAG
GCGCCGGACC TGCCCAAAGT CCCGGTGGCG CCACACGACG GGACCATGGA TCCGGACCCC
GTGCAGGAAA CCGACGCGCC GGTTGAAGCC CCGGCCCCGA GAGATGTCGC GCCTGCAGAG
GCCGAAGTTC CCATACGCAA GACCAGCGTG CTGGCAGCCG AGGACAACAA GACGAACCAG
CTTGTGTTTC GCAAGATGGT GAAGGGACTC AATATCGATC TGCGCTTTGC CAACAATGGC
GAAGAGGCTG TCGCCGCCTT TGAAGAAGAC CGTCCGGACA TGATCTTCAT GGATATCTCG
ATGCCCAAGA TGGACGGGAT GGAGGCCACC CAGAAGATCC GCGCGCGGGA GGCGGAACTG
AGCCTGCCGC CGGTGCCGAT CTGCGCGCTG ACCGCGCATG CCATGGACGG CGACGCAGAA
AGGATCCTTG CCGCCGGATT GGATCACTAC CTGACCAAAC CGCTGAAGAA GACGGAAATT
CACGCGCGTA TCGAGGCGCA GGTCCCCGCG GGGCGTTTAC CCCTGATCGA GGAGCGCTAG
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| Protein sequence | MQSAEIESKL AAERRARLTA ERLLAQKQEE LYAANQKLSR HAFTLSDQIV EQRHAAEELK
DENFQVRSDL RRAEQRLWTS FETIEDGFAV FDASRRLVLA NPAYVSIFDG LEDVAPGIGY
AELLRLCAEE GIIDTEGLSR QDWCAQMEMR WNGAQIEPAV VRLWNGFSIK LVERRGEDGD
IVSLCLNITD TIKREQELTL ARTRAEAANR AKSAFLANMS HELRTPMNGV VAMSELLNES
ALDEEQALYV ETIRKSGEAL LVIINDVLDY SKMEAEKLQL HPAPFDLERL MHDVVMLTKP
TAQEKSVDLM LDYDIFLPSH FIGDQGRLRQ VMTNLLGNAV KFTLEGHVLI RVIGMPPEDG
TQEIIVSIED TGIGIAPEMI DHIFGEFNQA EDERNRAFEG TGLGLAITKQ LIDLMGGEIW
VDSEIGEGSC FSFRIALPLD AADGEPPLSV SSELRRVLIV EEGELNRSIL ERQLAPLGVS
VALATSAEEA LSYLDANPDV DAVLTDLVMP GLSGSELARR VRDRVGGPPV ILLSSAMLGQ
LTAEDRNLFE VTLNKPVMRA DLYAALNTLA QRNKVLKLTD PITEDAGPPA GAEVISMIPA
SAPPALDPVV EPGPFVSARA AKVAREATPA SFVSAKATQQ APDLPKVPVA PHDGTMDPDP
VQETDAPVEA PAPRDVAPAE AEVPIRKTSV LAAEDNKTNQ LVFRKMVKGL NIDLRFANNG
EEAVAAFEED RPDMIFMDIS MPKMDGMEAT QKIRAREAEL SLPPVPICAL TAHAMDGDAE
RILAAGLDHY LTKPLKKTEI HARIEAQVPA GRLPLIEER
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