| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3286 |
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| Symbol | ccdA |
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| ID | 5712343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3452504 |
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| End bp | 3453217 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269214 |
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| Product | cytochrome c biogenesis protein |
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| Protein accession | YP_001534620 |
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| Protein GI | 159045826 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.549106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA TCCTTGGATA TGGCGCGGGG CTGCTGACGC TCATCAACCC CTGCGTGTTG
CCGGTGCTGC CGATCGTGCT GGCCACCGCG TTGCAGGCGG ACCCGCGCGG CCCTCTGGCC
CTGGCCGCAG GCATGAGCCT GGCCTTCGTG ACGCTGGGGC TCGGGGTGGC GACCCTGGGC
CGGAGTGTCG GCTTGGGCGA GGAGCAGGTC GGGCAGGCGG CGGCGGTTCT GATGATCCTT
TTCGGGCTCG TGCTGCTGGT GCCGCGGTTC AGCGCCGGGT TCGCCACGGC CACGGCGGGC
ATGTCGGCGC GGGCCGATGC CGGGATGGAC GAGATCGACC GCAGCGGCGT CAAGGGCCAG
TTCATCGGTG GCATGTTGCT CGGCGCAGTC TGGAGCCCCT GTGTGGGCCC GACCCTGGGG
GCCGCGATCT CGCTGGCCTG GCAGGGGGAG AGCCTGTGGC GCGCGGGCAG CATCATGGCG
GCCTTCGCGC TGGGTGTGAG CACGGTGATC CTGGCGCTCG GCTATGGCGC GCGGGCGGCG
ATCCTGCGCC GCCAGGCCCT GATGCGCCGG ATCGCTCAGT ATGCGCGCCC GGTGATGGGC
GGCGTTTTCG TGGCCGTGGG CACGGGTCTG TTATTCGGGG TCCATCACAT GGCCGAAGCT
TGGGCGGTGG AGACCCTGCC GCCCTGGCTG ATCGACCTGT CCGTTTCGTT GTAA
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| Protein sequence | MDLILGYGAG LLTLINPCVL PVLPIVLATA LQADPRGPLA LAAGMSLAFV TLGLGVATLG
RSVGLGEEQV GQAAAVLMIL FGLVLLVPRF SAGFATATAG MSARADAGMD EIDRSGVKGQ
FIGGMLLGAV WSPCVGPTLG AAISLAWQGE SLWRAGSIMA AFALGVSTVI LALGYGARAA
ILRRQALMRR IAQYARPVMG GVFVAVGTGL LFGVHHMAEA WAVETLPPWL IDLSVSL
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