Gene Dshi_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3212 
Symbol 
ID5712268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3377980 
End bp3379251 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID641269139 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_001534546 
Protein GI159045752 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAAC CTGAGAAGTC TTCATCGCGC CTGCTGGCAT CTTCTGGTCG CCGCGCTTTT 
CTGGGGGCCA GCGCCGGGCT TGGGGCTGCT GCCGTCGCCG GGCTTGCGGC CAGGGCCGCG
CCGCTTGCCG TACCCGAAAG CAACCGGACC ATGGGCGATC CGATCCCGGA GACGGATTAC
GGTATGCCGA TCGAGTACGA GGACCACGTC CGGCGCAGGC GCACGGATGT TTTCGTCAAT
CGGCAGAACT ATTCTGACTG GAGCATGACC CCCCTGCATC AACAGTTGGG CATCGCGACG
CCCAACGGGC TGTTCTTCGA GCGCCACCAT AACGGCGTTG CCCGGATTGA CCCGGATGTG
CACCGGGTCG CGATCCACGG AATGGTGCGG CAGCCGCTCC TGTTCTCGAT GGACGACCTG
ATGCGGTATC CTTCGGTCTC GCGGTTTCAT TTTCTGGAGT GCTCCGGCAA CGGGCTGACG
GATTGGCGCG AGGCACGTTC GACCACCGTG CAACAAAGCC ATGGCCTTCT GTCCTGCGCG
CAATGGACCG GCATCCCCCT GTCATGGCTT CTGGATGAAG CGGGCCTGCA GGACGGCGCG
AGCTGGGTCG TTCTGGAGGG CGCCGATGGG TCCGGGCACC TGCGATCGAT CCCGATCGAC
AAGATCATGG ATGATGCGCT GCTGGCCTAT GGTCAGAATG GTGAGATGCT GCGGGCGGAG
CAGGGCTATC CGGTGCGTGC GATCCTTCCC GGCTGGGAAG GAAACACCAA CGTCAAATGG
CTGCGCCGGA TCTATGTGAC AAACGAACCG TTGCACGTTC GGGGCGAGAC CGCGCGCTAT
ACCGACCCCA TGCCGGATGG CAAATGGCGG CAGTTCTCCA TGGAGATGGA GGCGAAATCG
GTCATCACCA ACCCGTCCGG GGGCATGCGC CTGCCCGGAC CGGGCCCGGT GGAGCTGTCC
GGCTTTGCGT GGTCCGGAAA CGGCACGATC AGCCATGTGG ACGTGACCGT CGATGGTGGG
CGCAGCTGGG TCGAAGCGCA ACTCGAAGGC CCGGTGATGG AGAAGTGCCT GACGCGCTTC
CGGTTCCGGT GGAACTGGGA CGGAACGCCG GCGAAGATTG CCAGTCGCGC CGTCGACAGC
ACGGGATACG TGCAGCCCAC CGCCGAGCAA CTGGCGCGAG TCCGGGAGAT CTCGGGCTTC
GTGCAGCACA ACAATGCGAT CTTCCCATGG ACGATCGCTT CCAACGGGGA GGTCGGCAAT
GCAATCGCGT AA
 
Protein sequence
MDQPEKSSSR LLASSGRRAF LGASAGLGAA AVAGLAARAA PLAVPESNRT MGDPIPETDY 
GMPIEYEDHV RRRRTDVFVN RQNYSDWSMT PLHQQLGIAT PNGLFFERHH NGVARIDPDV
HRVAIHGMVR QPLLFSMDDL MRYPSVSRFH FLECSGNGLT DWREARSTTV QQSHGLLSCA
QWTGIPLSWL LDEAGLQDGA SWVVLEGADG SGHLRSIPID KIMDDALLAY GQNGEMLRAE
QGYPVRAILP GWEGNTNVKW LRRIYVTNEP LHVRGETARY TDPMPDGKWR QFSMEMEAKS
VITNPSGGMR LPGPGPVELS GFAWSGNGTI SHVDVTVDGG RSWVEAQLEG PVMEKCLTRF
RFRWNWDGTP AKIASRAVDS TGYVQPTAEQ LARVREISGF VQHNNAIFPW TIASNGEVGN
AIA