| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3189 |
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| Symbol | |
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| ID | 5712245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3352427 |
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| End bp | 3353137 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641269116 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001534523 |
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| Protein GI | 159045729 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAT CGCATCTCAA TACGGCAAAA GCGAGTTTGC TGCTGTCGAA CTGCCCGGAC
GAGGTGGCCA CGAAGATCCT CAAAAGGTCG TCGGTCAAAC GCTATGACCG CGGCCAGGTG
CTGTTTTCCC ACGGCGAGGA TGCGCACTCG GTCTATATCG TGATCGACGG CTGGGTGAAG
CTGTATCGAA TCACCCCCAA TGGCAGCGAG GCGGTGGTCG GCGTTTTCAC CCGGGGGCAC
AGTTTCGGCG AGGCGGTGGC GCTGCGCAAC GATACCTATC CGGTCGCGGC CGAGGCTGCC
ACGGATGTGC GTGTGGTGCA GGTGCCATCG GCCGAGGTGC TCAATGTCAT GCGCTCCCAT
CCGGAGGTCT GCATCGCCAT CTTGTCCTCG ACCTTTGCGC ATCTGCACGC GCTTGTGGCG
GAGGTGGAGC AGCTCAAGGC CCGCTCCGGA GCGCAGCGCG TCGCGCAGTT CCTGTTGTCG
CTCGTGACCT GCGATGAAGG GAGCTGCCGC GTGATGCTGC CCTATGACAA GATCCTGATC
GCGGGGCGCA TCGGGATGAA ACCCGAAAGC CTCAGCCGCG CCTTTGCGCG CCTCAAATCC
CAGGGCGTCA CGATCAAGCA GAACCATGCG GAGATCGCCT GCATCGACAC CCTGCGCGAC
TTCGCCGACG AAGACGGCAC GGGCGAGGTG CCGCGCCAGC GCATGATGTA G
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| Protein sequence | MALSHLNTAK ASLLLSNCPD EVATKILKRS SVKRYDRGQV LFSHGEDAHS VYIVIDGWVK
LYRITPNGSE AVVGVFTRGH SFGEAVALRN DTYPVAAEAA TDVRVVQVPS AEVLNVMRSH
PEVCIAILSS TFAHLHALVA EVEQLKARSG AQRVAQFLLS LVTCDEGSCR VMLPYDKILI
AGRIGMKPES LSRAFARLKS QGVTIKQNHA EIACIDTLRD FADEDGTGEV PRQRMM
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