Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3134 |
Symbol | |
ID | 5710986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3301023 |
End bp | 3302168 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269061 |
Product | BlaR1 peptidase M56 domain protein |
Protein accession | YP_001534468 |
Protein GI | 159045674 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGA TGACCCCCGC GATTGATCTG TTCATTGATG CGAATATCTT GCTGCTGCTG GCTTTCTGCC TCTGGCGCGT TGCGCAATTT TTTCTGCAGC GCACGGCCCT GCGCCACGAC CACGGGTTCC AGGCCGGTTT GCTCAAGACG GTGCTGTTGA TCACCCTTCT GAGCCCGATT CTCGGCCTCG GTTTCACCAG CTTGGGAAAC TATCTCGTCC CCGACACTCC GACGACGCTC AGCGACATTG CCGTGGCGGC ATATCTCGGC GGCAGCATCG CGATGCCTGC GGTGGACTTC GAGGCCCTGC TGAATACCCG CAGAACATTT GTGGAAACCT TCTCCGCGGG GAAGGTTTCC TGGGCCGCAC CGCTGCTGGC GGGTTTCGCG GTGGTGAGTG TTGCGTTGAC CCTCCGGCTG CTGCGTTCCG CCCTCTGCGT TCGGCGCACC CTGGCCGACA GCTACCTGTG GCGGCGCACC GGGCGGGTGG ATATCCGGCT CTCGGATCGA ATCACCGTGC CCTTCGCGGC GCGCGGTTTG CGGCGGCGGC ATGTGGTCCT GCCCACCTGC CTGCTGACCC GGCCCCGTGA CCTGCGCGTG GTGCTCGCCC ACGAGTTCCA GCACCTGCGC GCGGGCGACG TGGAATGGGA GCTGGCGCTG GAAGCCCTCC GTCCCCTGGT GTTCTGGAAC CCGGCCTTCA TTCTGTGGAA ACGCGCGTTC GAGAAACTGC GCGAGCTGAG CTGCGACCAG AGGGTCCTCG CCTCCCGCTG CATCACGCCG CACGAGTACG CGGCCTGTTT GCTGACTTTC TGCGCGCGTC GCCGGACCGG CCCCGCCCTT GCCCGGGTGG CCTTCGTGTC AGTGGCGCCG AACACGCCCA AGCGCGTGTT GGAGCATCGC ATCCTGTCGC TTTACCGCCT GCCCAGCTTC CGCCACACCC GGCCCATGCT GGCCGCGCTG GCGCTGGTCC TTGCCCTGGG CATCGGCAGC ATCGCCGCCA CCGTGCGCGC CCCGGGCGAC TGGAGCCAGG ATCGCCTGAT GCTGTCGACC ATCGTCAATC TCGAACGCCT CGACGCCATC ACCCGGCAGC AGGGCCGCGC CACCCCGGCC AGCGGCCTGC TCGGCGTCGC CCCCATGTCC CGCTAG
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Protein sequence | MTAMTPAIDL FIDANILLLL AFCLWRVAQF FLQRTALRHD HGFQAGLLKT VLLITLLSPI LGLGFTSLGN YLVPDTPTTL SDIAVAAYLG GSIAMPAVDF EALLNTRRTF VETFSAGKVS WAAPLLAGFA VVSVALTLRL LRSALCVRRT LADSYLWRRT GRVDIRLSDR ITVPFAARGL RRRHVVLPTC LLTRPRDLRV VLAHEFQHLR AGDVEWELAL EALRPLVFWN PAFILWKRAF EKLRELSCDQ RVLASRCITP HEYAACLLTF CARRRTGPAL ARVAFVSVAP NTPKRVLEHR ILSLYRLPSF RHTRPMLAAL ALVLALGIGS IAATVRAPGD WSQDRLMLST IVNLERLDAI TRQQGRATPA SGLLGVAPMS R
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