Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3133 |
Symbol | |
ID | 5710985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3300641 |
End bp | 3301048 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641269060 |
Product | putative transcriptional regulator |
Protein accession | YP_001534467 |
Protein GI | 159045673 |
COG category | [K] Transcription |
COG ID | [COG3682] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0957082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA AAAAACCCGC CCACCTGCTG ACCGATGTCG AACTGGAATT CATGACCGAG CTCTGGGTCC TGGGCGAGGG CGGCGTGCGC GACGTGCTGG ACCGGCTGCC ACCGGAGCGC AACCTCGCCT ATACTTCCGG GGCGACCATC CTGCGCATTC TCGACGACAA GGGGTTCGTC TCCAGCCGCA AGGAGGGCAA GACGCTCATC TATACCCCTG TGCTGGAAAA GGACGCCTAT CAGACCCGGT CGCTGCAAAA TCTGTCGCGC ACGCTTTTTG ACGACACACC GGCCAGTCTT GTGGCACGGT TGGTGGATGA TGCGGGGCTG AGCGCCTCGG ATCTGGAGGA TATTCGGGCG CTGGTGGAGA GGAGGCTCCA GGATGACGGC GATGACCCCC GCGATTGA
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Protein sequence | MRKKKPAHLL TDVELEFMTE LWVLGEGGVR DVLDRLPPER NLAYTSGATI LRILDDKGFV SSRKEGKTLI YTPVLEKDAY QTRSLQNLSR TLFDDTPASL VARLVDDAGL SASDLEDIRA LVERRLQDDG DDPRD
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