Gene Dshi_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3122 
Symbol 
ID5710974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3289790 
End bp3290278 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content64% 
IMG OID641269049 
Producthypothetical protein 
Protein accessionYP_001534456 
Protein GI159045662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.417087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG ATCGCTGGAT TGCGCTTGTT TTGCTGGGGG TGTGCCTGAT CTACGGCTAC 
ACGGCCTGGT TCACGATGGA TGCCGATCTT GCCCCGTTCA TGCGGCGCAA TCCGATCTGG
CCCTCGACAT TCCCCAAGGT TCTGTCGGTG CTGGGCGCCG TGGCCGCGTT GGTGATCCTG
CTGGGGCTCG AAGGGCCGCA GAAGCCGCCC AAGGCGGGCG ACATCGATTA CCGGCGGCTG
GGCGATTACA AGATCGGGCA GGCGGCCCTG TTGCTGGGGC TGATGGTGGG CTATGCGCTG
TTGCTGCGTC CGGCGGGGTT TTTGGTGTCG ACCACGTCCT TTCTGATCCT CGGCTCGGTG
ATCCTCGGCG AGCGGAACTG GCCGGTGATG ATCGGTGTGG CGGTCGTGGC GACCGGGGCG
ATCTGGTACC TGGTGCAGGA GGTGCTGGGC ATCTTCCTGC GTCCGCTGCC GATGTTCATG
GGGGTTTGA
 
Protein sequence
MALDRWIALV LLGVCLIYGY TAWFTMDADL APFMRRNPIW PSTFPKVLSV LGAVAALVIL 
LGLEGPQKPP KAGDIDYRRL GDYKIGQAAL LLGLMVGYAL LLRPAGFLVS TTSFLILGSV
ILGERNWPVM IGVAVVATGA IWYLVQEVLG IFLRPLPMFM GV