Gene Dshi_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3118 
Symbol 
ID5710970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3285065 
End bp3286309 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content70% 
IMG OID641269045 
Producthypothetical protein 
Protein accessionYP_001534452 
Protein GI159045658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0457389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG CCCTTCTCTG CCTCTGGATC GCCCTGCTCC TGCCGTCCGC CGCCGCGGCC 
CAGGACCCGC AAGTGCGGCT CGAACTTGCG GCCGAGGAGA CCGAGATCGG CCAACCGCTG
ATCCTGCGGC TTACCGTGCT CGTGCCCAGC TTCATGCCCG ACCCGCCGTC CTTGCCCAGC
TTCGAGATCC CCGACCTGAT GGTGCGGCTC AACGATCGCG CCACAACCCC CACCAGCCAG
CAGGTCGATG GCGAAACCTG GTCCGGCATC ACCCGCAGCT ACAGCCTTTA TCCGATGATC
CCCGGCCCTT TCGTGCTGCC TCCGCAAGAG GTCGCGATCA CCTATGCCGC GGACGGCGCG
ACCCCGGAAA CCACCACGGT GATGACCGAA GAAATCCGGT TCGAGGCGAT CCTGCCCGAG
GGGGCCGAGG GACTGGACCC GCCCCTGATC GCCTCCGACC TGACCGCAAC GCAGCAGATC
ACCCTCCCCG AAGGCGACCT GACCGTGGGC GACGCGATCA CCCGCCAGAT CGTGGTGAAG
ATCGAAGGCA CCCCGCCACT CTTCATCCCG CCCCTGATGG GCACCGAGGG CACCGAAACC
CTGCGCCCCT ACCCCAAGGA GCCGGTACTG GAGGAGTCCG AGAACCGCGG GATCCTGTCG
GGCACACGCA CCGAAACCGT CACCTACGTG GCCCTGGCCG AAGGCACCGC CACCCTGCCG
CCCCTCAGCC TGTCCTGGTA CAACCTGTCC TCCAAGGCGG TGGAAACCAT CGAGCTCGAC
GGCACCACGG TCGAGGTCGC CGCCGGCCCC CCCGCCCCAT TCCGTCCGGA CCCGGGCCAG
ATCGCGGGCT GGCTTCTGGC CCTGATCGCC ATGGGCAGCG CGGCGTTTTT CGGCTGGCGG
CGGTTCGGCC CCGGCCTGCG CGCGCGGGCA AGGGCCCGCC GCGCGGCGCG GCAGCTCTCC
GAGGCGCACC TCTACAAGAC CCTGGAACAG GCCGTCGGGG CCCGCGACCT CACCTTGAGC
CTGCAGGCGC TGCGCCTTTA CGAAACGCAC CACCCCGAGG CCCGAAGGCC CGCCGATCTC
GACGCGGCCC TCCATGCGGT CACGGAAATC AGGTTCGGCC GCGCCACGCT CGATCAAGGC
GCGATCAGCG CCCGCTGGGC CGCGCTGCAC AAGGCCCTGC CGGGCCTGCG CCCCCACCGC
GTGCACAAGG CCGAACAGAC CCTGCCAGCG CTCAATCCGT TCTAG
 
Protein sequence
MMRALLCLWI ALLLPSAAAA QDPQVRLELA AEETEIGQPL ILRLTVLVPS FMPDPPSLPS 
FEIPDLMVRL NDRATTPTSQ QVDGETWSGI TRSYSLYPMI PGPFVLPPQE VAITYAADGA
TPETTTVMTE EIRFEAILPE GAEGLDPPLI ASDLTATQQI TLPEGDLTVG DAITRQIVVK
IEGTPPLFIP PLMGTEGTET LRPYPKEPVL EESENRGILS GTRTETVTYV ALAEGTATLP
PLSLSWYNLS SKAVETIELD GTTVEVAAGP PAPFRPDPGQ IAGWLLALIA MGSAAFFGWR
RFGPGLRARA RARRAARQLS EAHLYKTLEQ AVGARDLTLS LQALRLYETH HPEARRPADL
DAALHAVTEI RFGRATLDQG AISARWAALH KALPGLRPHR VHKAEQTLPA LNPF