Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3118 |
Symbol | |
ID | 5710970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3285065 |
End bp | 3286309 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269045 |
Product | hypothetical protein |
Protein accession | YP_001534452 |
Protein GI | 159045658 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0457389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGCG CCCTTCTCTG CCTCTGGATC GCCCTGCTCC TGCCGTCCGC CGCCGCGGCC CAGGACCCGC AAGTGCGGCT CGAACTTGCG GCCGAGGAGA CCGAGATCGG CCAACCGCTG ATCCTGCGGC TTACCGTGCT CGTGCCCAGC TTCATGCCCG ACCCGCCGTC CTTGCCCAGC TTCGAGATCC CCGACCTGAT GGTGCGGCTC AACGATCGCG CCACAACCCC CACCAGCCAG CAGGTCGATG GCGAAACCTG GTCCGGCATC ACCCGCAGCT ACAGCCTTTA TCCGATGATC CCCGGCCCTT TCGTGCTGCC TCCGCAAGAG GTCGCGATCA CCTATGCCGC GGACGGCGCG ACCCCGGAAA CCACCACGGT GATGACCGAA GAAATCCGGT TCGAGGCGAT CCTGCCCGAG GGGGCCGAGG GACTGGACCC GCCCCTGATC GCCTCCGACC TGACCGCAAC GCAGCAGATC ACCCTCCCCG AAGGCGACCT GACCGTGGGC GACGCGATCA CCCGCCAGAT CGTGGTGAAG ATCGAAGGCA CCCCGCCACT CTTCATCCCG CCCCTGATGG GCACCGAGGG CACCGAAACC CTGCGCCCCT ACCCCAAGGA GCCGGTACTG GAGGAGTCCG AGAACCGCGG GATCCTGTCG GGCACACGCA CCGAAACCGT CACCTACGTG GCCCTGGCCG AAGGCACCGC CACCCTGCCG CCCCTCAGCC TGTCCTGGTA CAACCTGTCC TCCAAGGCGG TGGAAACCAT CGAGCTCGAC GGCACCACGG TCGAGGTCGC CGCCGGCCCC CCCGCCCCAT TCCGTCCGGA CCCGGGCCAG ATCGCGGGCT GGCTTCTGGC CCTGATCGCC ATGGGCAGCG CGGCGTTTTT CGGCTGGCGG CGGTTCGGCC CCGGCCTGCG CGCGCGGGCA AGGGCCCGCC GCGCGGCGCG GCAGCTCTCC GAGGCGCACC TCTACAAGAC CCTGGAACAG GCCGTCGGGG CCCGCGACCT CACCTTGAGC CTGCAGGCGC TGCGCCTTTA CGAAACGCAC CACCCCGAGG CCCGAAGGCC CGCCGATCTC GACGCGGCCC TCCATGCGGT CACGGAAATC AGGTTCGGCC GCGCCACGCT CGATCAAGGC GCGATCAGCG CCCGCTGGGC CGCGCTGCAC AAGGCCCTGC CGGGCCTGCG CCCCCACCGC GTGCACAAGG CCGAACAGAC CCTGCCAGCG CTCAATCCGT TCTAG
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Protein sequence | MMRALLCLWI ALLLPSAAAA QDPQVRLELA AEETEIGQPL ILRLTVLVPS FMPDPPSLPS FEIPDLMVRL NDRATTPTSQ QVDGETWSGI TRSYSLYPMI PGPFVLPPQE VAITYAADGA TPETTTVMTE EIRFEAILPE GAEGLDPPLI ASDLTATQQI TLPEGDLTVG DAITRQIVVK IEGTPPLFIP PLMGTEGTET LRPYPKEPVL EESENRGILS GTRTETVTYV ALAEGTATLP PLSLSWYNLS SKAVETIELD GTTVEVAAGP PAPFRPDPGQ IAGWLLALIA MGSAAFFGWR RFGPGLRARA RARRAARQLS EAHLYKTLEQ AVGARDLTLS LQALRLYETH HPEARRPADL DAALHAVTEI RFGRATLDQG AISARWAALH KALPGLRPHR VHKAEQTLPA LNPF
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