| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3110 |
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| Symbol | |
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| ID | 5710962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3276494 |
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| End bp | 3277162 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641269037 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001534444 |
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| Protein GI | 159045650 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGACG CGGATCTGTT GCAGAAACAT GGCTGGCTGG CCGGGCGGTC GCAGGCCTCT
CAACGCCGCA TCCTGTCCTG CGGGCGGCCG CGCCATTTCG CCAAGGACGA GGCCCTGTAC
CATTTCGGCG ACTCGTCGCG GGGCGTGTAT GGCATCGTCG CGGGCAATGT CAGCGTGTCG
ATTCCCAACG ACGTGGGCGC CGCGCAGACG GTTTACCTGG CGACGCCCGG GTTCTGGATC
GGGGATGCCG CGCTCTTTTC CGATCAGACC CGGCTTGTCA CCGTGATCGC GGAGACCGAG
GTCGATGCGC TGTTTCTGCC CAAGGCGCAA CTCGATGACC TGGTGCGGGA GCATCCCGAC
CTGCTGCGCG ATTTTTATGC GCTGAGCCAT CTGAACCTGA ATGTGGCGCT GTCGCTGATC
GCGAATCTCG TCACGCCCAA CGCGGCACAG CGGCTTGCGG CGTTTCTGTT GAACGTGGAC
GAGCGCCAGG TGAACCCGGG GGACTGGATA CAGGTGGCGC AGGATCGGTT GGCGTCGATG
GTGGCGTTGT CGACGCCGAC GGTGCAACGG CATCTCAGGA ATTTGAGCGC TGCCGGGTTG
GTCGAGATCG GATATGGGCG TATGCGGGTG ATCGAGCGCG CGGCGTTGCG CCGGTTTTTG
ATGGAATGA
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| Protein sequence | MSDADLLQKH GWLAGRSQAS QRRILSCGRP RHFAKDEALY HFGDSSRGVY GIVAGNVSVS
IPNDVGAAQT VYLATPGFWI GDAALFSDQT RLVTVIAETE VDALFLPKAQ LDDLVREHPD
LLRDFYALSH LNLNVALSLI ANLVTPNAAQ RLAAFLLNVD ERQVNPGDWI QVAQDRLASM
VALSTPTVQR HLRNLSAAGL VEIGYGRMRV IERAALRRFL ME
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