| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3095 |
|---|
| Symbol | |
|---|
| ID | 5710947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | + |
|---|
| Start bp | 3263379 |
|---|
| End bp | 3263990 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641269022 |
|---|
| Product | protein of unknown function DUF205 |
|---|
| Protein accession | YP_001534429 |
|---|
| Protein GI | 159045635 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0344] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0484205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC TGACCACCGC CCCCGGCCTG CTCGCCCTTG TCGGGCTCGC GGCCTACCTG
CTGGGTGCGA TTCCCTTCGG CCTGCTGATC GCGAAACTGT TCGGCCTCGG CAATCTGCGC
GAGATCGGGT CGGGCAATAT CGGGGCGACC AACGTGCTGC GCACGGGCAG CAAACCGGCC
GCGGCGGCGA CCCTGATCCT CGACGCGGGC AAAGGGGCCT TCGCGGTGAT CCTTGCGCGC
GTTCTGGTGG GCGAGGACGC CGCACAGATC GCCGGGGCGG CGGCCTTTCT CGGCCATTGC
TTCCCGGTCT ACCTGAAATT CAACGGTGGC AAGGGGGTGG CCACCTTCTT CGGCACCGTG
ATCGCCCTGT CCTGGCCGCT GGGGCTTGCG GCCGGTGCGA TCTGGCTCGC CACCGCCTAT
ACCTTCCGCA TCTCATCGCT TTCGGCCCTG ATGGCTGCAT TGATGACCCC GATCTTCGCC
TGGGGTTTCG GCCAGCGGGA ATTGGTCGTT TTGAGCCTGT TCCTCGGCTT TTTGATCTGG
ATCCGCCACA GAGAAAACAT AATCCGCCTG CTTTCTGGAA CCGAACCGAG GATCGGAGCC
AAGAAGAGGT AG
|
|---|
| Protein sequence | MPELTTAPGL LALVGLAAYL LGAIPFGLLI AKLFGLGNLR EIGSGNIGAT NVLRTGSKPA
AAATLILDAG KGAFAVILAR VLVGEDAAQI AGAAAFLGHC FPVYLKFNGG KGVATFFGTV
IALSWPLGLA AGAIWLATAY TFRISSLSAL MAALMTPIFA WGFGQRELVV LSLFLGFLIW
IRHRENIIRL LSGTEPRIGA KKR
|
|---|
| |