| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3026 |
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| Symbol | pdhR |
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| ID | 5710878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3195719 |
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| End bp | 3196486 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268953 |
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| Product | pyruvate dehydrogenase complex repressor |
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| Protein accession | YP_001534360 |
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| Protein GI | 159045566 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.509676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.414999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTCC AGCGTATCCA GTCGGAAAAA CTCTCGCACT CGGTCATTCG CCAGATCGAA
CAACTCGTTC TGCGCGGCAT TCTGCGGCCC GGAGAGCGGC TCCCCTCGGA GCGGGAGCTG
TCCGAGAAGC TCGGTGTCTC CCGTCCGTCC CTGCGCGAAG CACTGGCCGA GTTGCAGACC
CGTGGGCTGC TGGAGACCCG CGCGGGTGCG GGCGTATTCG TGGCCGATGT GCTCGGCTCC
GCCTTCTCGG ACGCGCTGAT CCAGCTTTTC GCCAAGCATG ACGAGGCGGT GTTCGACTAT
CTTGCCTTCC GCCGCGACTT GGAGGGGCTG GCGGCGGACC GGGCCGCCCG GCTCGGCTCC
GAGACGGACC TCAAGGTGGT CGACACGATC TTCCGCAAGA TGGAAGCGGC CCACTCCAAG
CGCAACCCGG ACGAGGAATC CATGCTCGAC GCGGAGTTCC ACCTGGCGAT TGTCGAGGCC
AGCCACAACG TGATCATGCT GCACATGATG CGGTCAATGT TCGACCTGCT GCGCGAAGGC
GTGTTCTACA ACCGCAAGAT CATGTTCAAG CAGCGCGCCA CACGGGATCA GCTGCTAGAA
CAGCACCGGG CGATCAACGC CGCCTTGCAG GCCCGCGATC CCCAGGCCGC GCGGGGGGCG
GTGCAGCACC ATCTGGATTT CGTCGAAGGC TCCCTCGCGG ACTGGCGCCA GATGGAAAAG
AACGAGGAAA TCGCGCGCCA GCGCTACGAG CACGAACAGG CCCGCTGA
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| Protein sequence | MPFQRIQSEK LSHSVIRQIE QLVLRGILRP GERLPSEREL SEKLGVSRPS LREALAELQT
RGLLETRAGA GVFVADVLGS AFSDALIQLF AKHDEAVFDY LAFRRDLEGL AADRAARLGS
ETDLKVVDTI FRKMEAAHSK RNPDEESMLD AEFHLAIVEA SHNVIMLHMM RSMFDLLREG
VFYNRKIMFK QRATRDQLLE QHRAINAALQ ARDPQAARGA VQHHLDFVEG SLADWRQMEK
NEEIARQRYE HEQAR
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