| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3023 |
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| Symbol | nth |
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| ID | 5710875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3193311 |
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| End bp | 3193955 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641268950 |
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| Product | endonuclease III |
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| Protein accession | YP_001534357 |
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| Protein GI | 159045563 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.296739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.295544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAGC AACTCGATTA TCATACGATC CGCGAGATCT TCACCCGGTT CCAGGCCGCC
GAGGCCGAGC CCAAGGGCGA GTTGAACCAT GTCAACGCCT ACACCCTGGT TGTGGCCGTA
GCGCTTTCGG CACAGGCCAC GGATGCGGGC GTGAACAATG CCACCGAGGC CCTGTTCAAG
ATCGCCGATA CGCCCGAGAA GATGCTGGCC TTGGGCGAAG AGGGCGTGAT CCAGCATATC
AAGACCATCG GGCTGTATCG CAACAAGGCC AAGAACGTCA TCAAGCTCAG CCGCATTCTG
GTCGAGCAGT ATGGCGGTGA GGTGCCGAAT TCCCGCGCGG CACTCGAGAG CCTGCCGGGG
GTGGGCCGCA AGACCGCCAA TGTGGTGCTC AACATGTGGT GGGGGCATCC GAGCCAGGCC
GTGGACACCC ACATCTTCCG CGTCGGCAAC CGCAGCGGCA TCTGCCCGGG CAAGGACGTG
GTCGCGGTCG AACGCGCCAT CGAAGACCAC ATCCCCGTCG ATTTCCAGCA CCACGCCCAT
CACTGGCTGA TCCTGCATGG CCGCTACATC TGCAAGGCGC GCAAACCGGC CTGCGGGGCC
TGCCTGATCC GCGATCTCTG CCAATTCGAG GACAAGACCG AATGA
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| Protein sequence | MAKQLDYHTI REIFTRFQAA EAEPKGELNH VNAYTLVVAV ALSAQATDAG VNNATEALFK
IADTPEKMLA LGEEGVIQHI KTIGLYRNKA KNVIKLSRIL VEQYGGEVPN SRAALESLPG
VGRKTANVVL NMWWGHPSQA VDTHIFRVGN RSGICPGKDV VAVERAIEDH IPVDFQHHAH
HWLILHGRYI CKARKPACGA CLIRDLCQFE DKTE
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