Gene Dshi_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2993 
Symbol 
ID5710845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3157143 
End bp3157856 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID641268920 
Producthypothetical protein 
Protein accessionYP_001534327 
Protein GI159045533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGT TTCCCGCCAT CGCGACCGCT ATCCTGACCC TCTCCTTCGT GCTCTCGCCC 
CTCGTGACCG AGCCGTTCAG CGGGTTTCGC GCCGAACAGT TGCCGATCCC GCAGGTGCGC
CCCCCGGTGC AGCCCGCGGG CTATGCCTTC GCGATCTGGG GCGTGCTTTA TGTCTGGCTG
GTGGTGTCGG CGGCCTTCGG GCTCTGGAAG CGGCCCATGG CCGAAGATTG GGACCATGTG
CGCTGGCCGC TGATGGTCAG CCTCGCGGCG GGCACGCCCT GGCTCTGGCT TGCGACCCAT
TCGGCGATCG GGGCGGCGGT GCTGATCTTC GCCATGCTGA TCCCGGCGGT CATCGCGCTT
CTGCGCGCGC CGCTTCGCGA CCGGCTCTGG CTGCGCACGC CTATCGCGCT TTATGCCGGG
TGGGTGAGTG CGGCGGCCTG CGTGTCGCTC GCCACGGTCG CGGCGGGCTA CGGGGTGGGG
TTCGGGGCGC TGTTCTGGGC AGTGGTGGGC GTGTCGCTGG CCTTTTTCAT CGCACGCTGG
ACCCAGAGCC GCCGGGCCGA CACGCCGGAA TACAGTGTCG CGGTGATCTG GGCCCTGACC
GGCATCGTGG TGGCCAATGG CACGACCGAG CCGCTGGTCT CTGTGCTGGC CATGGTCGGG
ATCATCGCGC TGGTGCTGTT GTGGTGGACC GACCGGCATC CGGCCAAGAC CTAG
 
Protein sequence
MSKFPAIATA ILTLSFVLSP LVTEPFSGFR AEQLPIPQVR PPVQPAGYAF AIWGVLYVWL 
VVSAAFGLWK RPMAEDWDHV RWPLMVSLAA GTPWLWLATH SAIGAAVLIF AMLIPAVIAL
LRAPLRDRLW LRTPIALYAG WVSAAACVSL ATVAAGYGVG FGALFWAVVG VSLAFFIARW
TQSRRADTPE YSVAVIWALT GIVVANGTTE PLVSVLAMVG IIALVLLWWT DRHPAKT