Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2951 |
Symbol | |
ID | 5710802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3112137 |
End bp | 3113279 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268877 |
Product | hypothetical protein |
Protein accession | YP_001534285 |
Protein GI | 159045491 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0967598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0233852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAAGGCG CTTGGCAAGG CCGTTGCAAC GGCCTTGGTC GCCGCCGAGG GCGCGGATCA CATCGCGTGC AGCTGAGCGC CGCCGCCAGT ACCCGCGACT GGGTCGCCGA GGCCGTCCGC AAGCTCGAAG CGGATGTCCA GCGCTCCGCC GACACCCACC TGTTCAAGCT CGAGCTGCCC GGACTGCGCG GCGTGGACCT CTATCTCAAG GACGAGAGCA CACACCCTAC CGGCAGCCTG AAACACCGGC TGGCGCGATC CCTGTTCCTC TACGCGCTCT GCAACGGCCA GCTGTGCGCA GGCCGCCCGG TGATCGAGGC CTCCTCCGGC AGCACCGCGG TGTCCGAGGC CTATTTCGCC CAGATGCTCG GCCTGCCCTT CATCGCGGTG ATGCCGCGCA GGACCGCGCG CAGCAAGATC GCCGAGATCA CGCGCTTCGG CGGCACCTGC CATTTCGTCG ACAGCGCGCC CGAGATGCAC GCCGCCGCCA CCACACTCGC CGCAGAGACC GGCGGCTACT TCATGGACCA GTTCCTCTAT GCCGAACGGG CGACGGACTG GCGCGGCAAC AACAACATCG CCGAGAGCAT CTTTCGCCAG ATGGCGCGCG AACGCTTCCC CATCCCCGCC GCCCTGGTGA TGAGCGCGGG CACCGGCGGG ACCTCGGCCA CCCTGGGGCG ATACATCCGC TACCGGGGCT TCGAGACGCA GCTGGTGGTG GTCGATCCCG AGAACTCGGT GTTCTACGAC AGCTACATGA GCGGGGATGC CACGCTCAGC CGGGCCTGCT CCAGCCGGAT CGAGGGGATC GGGCGACCCA TCGTGGAGAA ATCCTTTCAG CCCGACGTGA TCGACACCAT GCTGCAGGTG CCCGATACCG CCAGCGTCGC CACCGCCCTG TGGCTGTCGG ACCGGATCGG GCGCAAGGTG GGCGGGTCCA CGGGCACGAA CCTCTGGGGC GCACTGCAGA TCGCGGACCG GATGCAGGCG GCAGGCACCG AAGGCTCGAT CGTCACGGTG ATGTGCGACG CCGGGGAGCG GTATCTCGAC ACCTATCACG ACCCGGACTG GGTGGCGCGG GAGATCGGCG ATATCGGGCC TGCGTGCGCC GCGCTCGCCC GCTGGGACCG GCACGCGGGC TGA
|
Protein sequence | MQGAWQGRCN GLGRRRGRGS HRVQLSAAAS TRDWVAEAVR KLEADVQRSA DTHLFKLELP GLRGVDLYLK DESTHPTGSL KHRLARSLFL YALCNGQLCA GRPVIEASSG STAVSEAYFA QMLGLPFIAV MPRRTARSKI AEITRFGGTC HFVDSAPEMH AAATTLAAET GGYFMDQFLY AERATDWRGN NNIAESIFRQ MARERFPIPA ALVMSAGTGG TSATLGRYIR YRGFETQLVV VDPENSVFYD SYMSGDATLS RACSSRIEGI GRPIVEKSFQ PDVIDTMLQV PDTASVATAL WLSDRIGRKV GGSTGTNLWG ALQIADRMQA AGTEGSIVTV MCDAGERYLD TYHDPDWVAR EIGDIGPACA ALARWDRHAG
|
| |