| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2934 |
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| Symbol | atpD2 |
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| ID | 5710785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 3090391 |
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| End bp | 3091815 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641268860 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001534268 |
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| Protein GI | 159045474 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.511404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0433672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG CAAAAGGCAA GGTGACCCAG GTCATTGGCG CCGTTGTGGA CGTGCAGTTC
GAGGATACCC TGCCGGAGAT CCTGAACGCG CTGAACACCG AGAACAACGG CAAGAAACTG
GTTCTGGAAG TGGCCCAGCA CCTGGGCGAG AACACCGTGC GGACCATCGC GATGGACGCG
ACCGAGGGTC TCGTGCGCGG CGCGGAAGTG ACCGACACCG GCGGCCCGAT CACCATCCCC
GTGGGCAACG CGACCCTGGG CCGCATCATG AACGTCATCG GTGAGCCGAT CGACGAGAAG
GGCCCGGTCG AGGCTTCGGA AAGCCGCGCG ATCCACCAGC CCGCGCCGGA GTTCAGCGAA
CAGTCCACCG GGTCCGAGAT CCTCGTGACC GGCATCAAGG TGATCGACCT GCTGGCGCCC
TATTCCAAGG GCGGCAAGAT CGGCCTCTTC GGCGGTGCCG GCGTGGGCAA GACGGTTCTC
ATCATGGAGC TGATCAACAA CATCGCCAAG GTGCACTCGG GCTACTCCGT GTTCGCCGGC
GTGGGGGAGC GGACCCGCGA GGGCAACGAC CTCTACCACG AGATGATCGA ATCCAACGTG
ATCAAGCCCG ACAACCTGTC CGAGAGCCAG GTGGCCCTGG TCTATGGTCA GATGAACGAG
CCTCCGGGGG CCCGTGCCCG CGTGGCGCTG ACCGGCCTGA CCCTGGCCGA GCAGTTCCGC
GACCAGTCCG GCACGGACGT TCTGTTCTTC GTGGACAACA TCTTCCGCTT CACCCAGGCA
GGCTCCGAGG TGTCGGCGCT TCTGGGGCGT ATCCCCTCGG CCGTGGGCTA CCAGCCGACG
CTGGCCACCG ACATGGGCCA GATGCAGGAG CGGATCACCT CGACCAAGGG CGGCTCGATC
ACCTCGATCC AGGCCGTGTA CGTGCCCGCG GACGACCTGA CCGACCCCGC GCCCGCCACG
ACCTTCGCCC ACCTGGACGC CACGACCGTT CTGTCGCGCG CGATCTCCGA ACTGGGCATC
TACCCCGCCG TCGACCCGCT CGACAGCTCC AGCCGGATCC TCGATCCGGG CATCGTCGGC
GAAGAGCATT ACCAGGTGGC CCGCGACGTG CAGGGGATCC TGCAGCGCTA CAAGTCGCTC
CAGGACATCA TCGCGATCCT CGGCATGGAC GAGCTGAGCG AAGAGGACAA GCTGACCGTG
GCCCGCGCCC GGAAGATCCA GCGCTTCCTC AGCCAGCCGT TCGACGTGGC CAAGGTCTTT
ACCGGCTCCG ACGGGGTGCA GGTGCCGATC GAGGACACCA TCAGCTCGTT CAAGGCGGTT
GTCGCCGGTG AATACGACCA CCTGCCCGAA GGGGCGTTCT ACATGGTGGG CGGCATCGAC
GAAGTGATCG CCAAGGCCGA GCGCATGGCC GCGGACGCGG CCTAA
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| Protein sequence | MANAKGKVTQ VIGAVVDVQF EDTLPEILNA LNTENNGKKL VLEVAQHLGE NTVRTIAMDA
TEGLVRGAEV TDTGGPITIP VGNATLGRIM NVIGEPIDEK GPVEASESRA IHQPAPEFSE
QSTGSEILVT GIKVIDLLAP YSKGGKIGLF GGAGVGKTVL IMELINNIAK VHSGYSVFAG
VGERTREGND LYHEMIESNV IKPDNLSESQ VALVYGQMNE PPGARARVAL TGLTLAEQFR
DQSGTDVLFF VDNIFRFTQA GSEVSALLGR IPSAVGYQPT LATDMGQMQE RITSTKGGSI
TSIQAVYVPA DDLTDPAPAT TFAHLDATTV LSRAISELGI YPAVDPLDSS SRILDPGIVG
EEHYQVARDV QGILQRYKSL QDIIAILGMD ELSEEDKLTV ARARKIQRFL SQPFDVAKVF
TGSDGVQVPI EDTISSFKAV VAGEYDHLPE GAFYMVGGID EVIAKAERMA ADAA
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