Gene Dshi_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2906 
Symbol 
ID5710757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3064847 
End bp3065854 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID641268832 
Producthypothetical protein 
Protein accessionYP_001534240 
Protein GI159045446 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.106091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.402062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CAGAGACCCT GGTTAAAGAT ATCGAACGGC TGGGGGAAAA GTTGGCCGAG 
GCCAAGGCCA GCATCGCCAC GCAAATCATT GGGCAACCTA CGGTTGTGGA CCTGTCCCTG
AACGCGATGC TGTCCGGGGG GCATGCCCTG CTGATGGGTC TGCCGGGGCT CGGCAAGACC
CTTTTGGTCG ATACGCTGAG CACGGTAATG GGGCTGAGCG CGAATCGGGT ACAATTCACG
CCTGACCTGA TGCCGGCGGA TATTCTCGGC TCCGAAGTGC TGGAAACCGG CGCGGATGGC
GCGCGGTCCT TCCGGTTCCT GGAAGGTCCG ATCTTCTGCC AGCTGTTGAT GGCGGACGAG
ATCAACCGCG CCTCGCCCCG GACCCAGTCG GCGCTGTTGC AGGCGATGCA GGAAAAGCAT
GTGAGCATCG CGGGCCAGGA ACGCCCGCTG CCCGCGCCGT TCCATGTGCT CGCCACCCAG
AACCCGATCG AGCAGGAGGG CACCTATCCG CTGCCCGAGG CGCAGCTCGA CCGCTTCCTG
CTCAGGATCG ACGTGGATTA CCCGGACCGC GAGACCGAGA AGGGCATCCT CATGGCCACC
ACCGGCATCG ACGGCGCGAC CGCGCATCCG GTGTTCACCG GGGCGGAGTT GATCCACGCC
CAGGAGGTCG TGCGCCGGAT GCCCGTGGGC GACGCGGTGG TCGAGATGAT CCTCGACCTG
GTGCGCGCGT GTCGGCCGAA CGAGCCGGAG GCCCATGACG CGGTCAACCG CTCGGTCTCC
TGGGGGCCGG GGCCGCGGGC GGCGCAGTCG CTGATGCTGT GCGTGCGGGC GCGGGCGCTT
CTGGACGGGC GGCTGGCCCC GTCGGCGGAG GATGTCGCGG CCCTGGCGCG GCCGATCCTG
TCGCATCGAA TGGCGCTGAG CTTTGCCGCG CGGGCCGAGG GCGTGATCCT CGAGGAGGTC
ATCGAGAATG TCACCCACGG CGTGACCCGG ATCGAGCGGG CCGCGTGA
 
Protein sequence
MADAETLVKD IERLGEKLAE AKASIATQII GQPTVVDLSL NAMLSGGHAL LMGLPGLGKT 
LLVDTLSTVM GLSANRVQFT PDLMPADILG SEVLETGADG ARSFRFLEGP IFCQLLMADE
INRASPRTQS ALLQAMQEKH VSIAGQERPL PAPFHVLATQ NPIEQEGTYP LPEAQLDRFL
LRIDVDYPDR ETEKGILMAT TGIDGATAHP VFTGAELIHA QEVVRRMPVG DAVVEMILDL
VRACRPNEPE AHDAVNRSVS WGPGPRAAQS LMLCVRARAL LDGRLAPSAE DVAALARPIL
SHRMALSFAA RAEGVILEEV IENVTHGVTR IERAA