Gene Dshi_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2891 
SymbolfabG 
ID5710742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp3046819 
End bp3047547 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID641268817 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001534225 
Protein GI159045431 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000353377 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGG AAGGAAAAAC CGCGATCGTC ACCGGGGGCG GGTCGGGATT CGGGGCCGGG 
ATCGTGCGCA AGTTCGCCGC CGAGGGCGCG CAGGTGATCG TGGCCGACAT CAACAAGGGC
GCGGCCGAGG CCGTGGCCGA AGAATATGGC GGAACGGCGG CGCAGGTCGA TGTCTCTGAC
GCGGACAGCA TGGCCGCTTT GGCCGAGGCC CACGGCGCGC CCGATATCCT CGTCAACAAT
GCGGGCATCA CCCATCTGCC GAAACCCATG GAAGAGGTGA CCGAGGAGGA GTTCGACCGC
GTGCTCGCCG TCAACGCCAA GTCGGTCTAT CTCAGCGCCC GGGTCTTCGT GCCCGCGATG
AAGGCGCGCG GCAGCGGCGC GATCCTCAAC ATCGCGTCGA CCGCCGGGGT CAGCCCGCGC
CCGAAGCTCA ACTGGTACAA CGCCTCCAAG GGCTGGATGA TCACCGCCAC CAAGGCGATG
GCGGTGGAAC TGGCGCCTTT CGGCATCCGC GTCAACGCGC TCAACCCCGT GGCGGGTGAG
ACGCCGCTGC TCGCCTCCTT CATGGGGGAG GACACGCCGG AGATGCGCGC GAAATTCCTC
GCCACGATCC CCCTGGGCCG GTTTTCGCAG CCCGAAGACC TGGGTAACGC GGCGGCCTTC
CTGTGCTCGG ACGAGGCCAG CATGATCACC GGGGTCGCCA TGGAAGTGGA CGGGGGCCGG
TGCATATGA
 
Protein sequence
MRLEGKTAIV TGGGSGFGAG IVRKFAAEGA QVIVADINKG AAEAVAEEYG GTAAQVDVSD 
ADSMAALAEA HGAPDILVNN AGITHLPKPM EEVTEEEFDR VLAVNAKSVY LSARVFVPAM
KARGSGAILN IASTAGVSPR PKLNWYNASK GWMITATKAM AVELAPFGIR VNALNPVAGE
TPLLASFMGE DTPEMRAKFL ATIPLGRFSQ PEDLGNAAAF LCSDEASMIT GVAMEVDGGR
CI