| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2884 |
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| Symbol | sucB |
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| ID | 5710735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3039475 |
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| End bp | 3040965 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268810 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001534218 |
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| Protein GI | 159045424 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.179625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.255606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAG AAGTCCGCGT CCCGACGCTG GGGGAAAGTG TCACCGAAGC CACGGTGGCC
ACCTGGTTCA AGAAGCCCGG CGATACCGTC GCGGTGGACG AGATGCTCTG CGAGCTGGAG
ACCGACAAGG TGACGGTGGA GGTCCCCTCC CCCGCCGCCG GCACCCTGGC CGAAATCGTC
GCTGCCGAGG GCAGCACCGT GGGCGTCGAT GCCCTGCTGG CCTCGATCGG CGAAGGCTCC
GGCGCAGCGG CGGCCGAGGC GGCGCCGGCG GCCCCGAAAG CGGCCCCGGC CGAGAGCGGC
GGCGAGAGCG TCGACGTGAT GGTCCCGACC CTGGGCGAGA GCGTGACCGA GGCCACGGTG
TCGACCTGGT TCAAGAAGGT CGGTGACACG GTTGTCCAGG ACGAGATGCT GTGCGAGCTG
GAAACCGACA AGGTGTCGGT CGAGGTGCCT GCCCCGGCGG CGGGTGTTCT GACCGAGATC
CTGGCGCCCG AGGGCGCCAC GGTGGAGGCC TCGGCCAAGC TCGCCGTGCT CGGCGGGGCC
GGCGCGGTCG CGGCCCCTTC GGAACCGGCT CCCGCACCGG CGGCGCCCAC CGCCCAGGGC
AAAGATGTGG AGGACGCGCC CTCGGCCAAG AAGCTGATGG CGGAGAACAA CCTTGCCTCT
GGCGATGTTC AGGGCACGGG CCGCGACGGG CGCGTGATGA AGGGCGACGT GCTGGCCGCA
CTGGCCGCAC CGAAAGCCGC CGCCCCGGCC CCGTCCGCCG CCCCGCGCGC CCCGGTGGCC
GCCGAGGACG CGGCGCGCGA AGAGCGGGTC AAAATGACCA AGCTGCGCCA GACCATCGCC
AAGCGCCTGA AGGACAGCCA GAACACCGCC GCGATGCTCA CCACCTACAA CGAGGTGGAC
ATGACCGAGA CCATGGCGCT CCGGAAAGAG TACAAGGACC TGTTCGAGAA GAAACACGGC
GTTCGCCTAG GCTTCATGTC CTTCTTCACC AAGGCCTGCT GTCATGCCCT GAAGGAGGTG
CCCGAGGTCA ATGCCGAGAT CGACGGCACC GACATCGTCT ACAAGAACTT CGTCCATATG
GGCATCGCCG CGGGCACGCC CCAGGGCCTC GTGGTGCCAG TGATCCGGGA CGCGGACCGC
ATGAGCTTTG CCGAGATCGA GGCGGCCATC GCCGAAAAGG GCCGCCGCGC CCGGGACGGC
AAGCTCAGCA TGGCCGAGAT GCAGGGCGGG ACCTTCACGA TCTCGAACGG CGGGGTCTAC
GGCTCGCTGA TGTCTTCGCC GATCCTGAAC CCGCCGCAGT CGGGCATCCT CGGCATGCAC
AAGATCCAGG ACCGCCCGAT GGTCATCAAC GGCGAAATCA AGATCCGCCC GATGATGTAC
CTGGCCCTCA GCTACGACCA CCGGATCGTG GACGGCAAAG GGGCGGTGAC CTTCCTCGTG
CGCGTGAAAG AGGCGCTGGA GGATCCCCGG CGGCTGCTGA TGGATTTGTA A
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| Protein sequence | MSVEVRVPTL GESVTEATVA TWFKKPGDTV AVDEMLCELE TDKVTVEVPS PAAGTLAEIV
AAEGSTVGVD ALLASIGEGS GAAAAEAAPA APKAAPAESG GESVDVMVPT LGESVTEATV
STWFKKVGDT VVQDEMLCEL ETDKVSVEVP APAAGVLTEI LAPEGATVEA SAKLAVLGGA
GAVAAPSEPA PAPAAPTAQG KDVEDAPSAK KLMAENNLAS GDVQGTGRDG RVMKGDVLAA
LAAPKAAAPA PSAAPRAPVA AEDAAREERV KMTKLRQTIA KRLKDSQNTA AMLTTYNEVD
MTETMALRKE YKDLFEKKHG VRLGFMSFFT KACCHALKEV PEVNAEIDGT DIVYKNFVHM
GIAAGTPQGL VVPVIRDADR MSFAEIEAAI AEKGRRARDG KLSMAEMQGG TFTISNGGVY
GSLMSSPILN PPQSGILGMH KIQDRPMVIN GEIKIRPMMY LALSYDHRIV DGKGAVTFLV
RVKEALEDPR RLLMDL
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