Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2873 |
Symbol | |
ID | 5710724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 3027513 |
End bp | 3028076 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641268799 |
Product | putative NnrU protein |
Protein accession | YP_001534207 |
Protein GI | 159045413 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACTTTC TTGTCCTGAT CGCCGGTCTC GCCCTCTGGG CCGGGGCCCA CTACTTCAAG CGGCTGATGC CGGCGCAGCG CGCCGCGATG GGGGACAAGG GCAAGGCCGT CGTCGCCGTC GCCATCGTCG CCAGCATCGT GCTGATGGTG ATCGGTTACC GCGGGGCGGA GTTCGTTTTT CTCTGGTCGC CGCCCGCCTT CATGACCCAT GTGAACAATA CGCTGATGCT GTTCGCGCTC TGGGTCTACG GATCGAGTGC GGCCAAGGGC GCGAAGGCCT GGCCCGCCAA CAAGATCCGG CACCCGCAAC TGACCGGGGT CAAGATCTGG GCGCTCGCGC ACCTGCTGGT CAATGGCGAT CTGGCCTCGA TCGTGCTTTT CGGCGGCTTG CTGGCCTGGG CGGTGGGCGA AGTGATCCTG ATCAACAAGG CCGAGCCCGA CTGGACCCCG CCCGAGACGG CCGGGATGAA GACCAAGATC CGCCTCGCTG TGATCACGGT CGTCCTCTAC CTGGTGATCG GCGGCATCCA TGCCTGGCTC GGCGTCTGGC CGTTCCCTGC ATAA
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Protein sequence | MYFLVLIAGL ALWAGAHYFK RLMPAQRAAM GDKGKAVVAV AIVASIVLMV IGYRGAEFVF LWSPPAFMTH VNNTLMLFAL WVYGSSAAKG AKAWPANKIR HPQLTGVKIW ALAHLLVNGD LASIVLFGGL LAWAVGEVIL INKAEPDWTP PETAGMKTKI RLAVITVVLY LVIGGIHAWL GVWPFPA
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