Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2846 |
Symbol | |
ID | 5710697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 3003577 |
End bp | 3004542 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641268772 |
Product | inner-membrane translocator |
Protein accession | YP_001534180 |
Protein GI | 159045386 |
COG category | [R] General function prediction only |
COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.207886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCG CCACCCTCCT GCAAGTCCTC GACAGCACGA TCCGTCTCGC CACGCCGCTG CTGCTCGCTT GCCTGGCGGG GCTGTTTTCC GAACGCGCGG GGATCTTCGA CATCGGGCTG GAGGGCAAGA TGCTGGTCGC GGCCTTCCTG TCGGCGGCCA TGGCGGCGAT CACCGGCTCG GTCTGGATCG GGCTCTTTGC CGGCGTCTTC GCGGCGCTGC TCTTCTCGGC GATCCACGGG CTGGCCTCGA TCACCTTCCG GGGCAACCAG CTGATCTCCG GCGTGGCGCT GAACTTCCTT GCCGCGGGGT TGACCGTCCT GATCGCACAG AGCTGGTTCA GCCAGGGCGG CCGCACCCCC TCGCTCATCG GCGGTGCGAG GTTCGAGCCG ATCACCCTGC CCTTCGCCGA AGCGCTGCAG AACGTCCCCA TCCTCGGGCC GATCTACTAT GAACTGATCT CGGGTCACAC GATCCTGGTC TATGTCGCCC TGCTCGCGGT GCCTGCAACC TGGTATATCC TCTTTCGCAC CCGGTTCGGC CTGCGCCTGC GCGCGGTGGG CGAGAACCCG GCGGCCGTGG ACACGGCGGG GATCTCGGTC GTGGGCCTGC GCTACGCCGC CGTGGCGATT TGCGGGCTGC TCTGCGGTCT CGCGGGGGCG TATCTGGCCA CGGGCCTCTC GGCGGGCTTT GTCAAGGACA TGACCGCCGG GCGCGGCTAC ATCGCGCTGG CGGCGCTGAT CTTCGCCAAA TGGCGGCCCT GGTACGCGCT CATGGCCTGC CTGCTCTTCG GCTTTCTCGA AGCCATCGCC AACCGGTTCC AGAACATCGA GATCCTGAGC ATCCCGATCC CGGTCCAGCT GATGCAGGCC CTGCCCTATA TCCTGACGGT CGTGATCCTC GCCGGTTTCG TGGGCAAGGC GATCCCGCCC CGCGCCGGCG GCGAGCCCTA TGTCAAGGAA CGCTGA
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Protein sequence | MDFATLLQVL DSTIRLATPL LLACLAGLFS ERAGIFDIGL EGKMLVAAFL SAAMAAITGS VWIGLFAGVF AALLFSAIHG LASITFRGNQ LISGVALNFL AAGLTVLIAQ SWFSQGGRTP SLIGGARFEP ITLPFAEALQ NVPILGPIYY ELISGHTILV YVALLAVPAT WYILFRTRFG LRLRAVGENP AAVDTAGISV VGLRYAAVAI CGLLCGLAGA YLATGLSAGF VKDMTAGRGY IALAALIFAK WRPWYALMAC LLFGFLEAIA NRFQNIEILS IPIPVQLMQA LPYILTVVIL AGFVGKAIPP RAGGEPYVKE R
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