| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2843 |
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| Symbol | rbsA2 |
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| ID | 5710694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 3000182 |
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| End bp | 3001828 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268769 |
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| Product | ribose import ATP-binding protein |
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| Protein accession | YP_001534177 |
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| Protein GI | 159045383 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.132709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGG GACACCCCCC GCGCGCAGGA CTGACCAACG GGGTGGGCTC CATGTCCGAC
ACGCAAGCAC CTGCGATCGA GCTTCGCGGG ATCTCCAAGG CCTTCGGACC GGTGCAGGCC
AACAAGGACA TCTCGATCCG GGTCATGCCC GGCACCATCC ACGGCATCAT CGGCGAGAAC
GGCGCAGGCA AATCCACGCT GATGAGCATC CTGTATGGCT TCTACAAGGC CGACGCGGGC
GAGATCTTCA TCAAGGGCCA GAAGACAGAA ATCCCCGACA GCCAGGCCGC GATCCGCGCG
GGCATCGGCA TGGTGTTCCA GCATTTCAAG CTGGTGGAAA ACTTCACCGT GCTGGAAAAC
GTCGTGCTCG GCGCCGAGGA GGGCGCGCTG CTGCGCCCCT CGCTTGCCAA GGCGCGCAAG
CTGCTGCGCG AGCTGTCCGA AGAATACGAG CTGAACGTGG CCCCCGACGC CCTGATCGAG
GATCTCAGCG TCGGCCACCA GCAGCGGGTC GAAATCCTCA AGGCGCTCTA CCGCAAGGCC
GACATCCTGA TCCTGGACGA ACCCACGGGC GTGCTGACCC CGGCCGAGGC CGACCACCTC
TTTCGCATCC TCGAAGGGCT GAAGGCCGAG GGCAAGACCA TCATCCTGAT CACCCACAAG
CTGCGCGAGA TCATGGAAAC CACCGACACG GTCTCGGTCA TGCGCCGCGG CGAGATGACC
GCCACCGTCA AGACCGCCGA CACCAGCCCC GAACAACTCG CCGAGCTGAT GGTGGGGCGC
AAGGTGCTCT TGCGCGTCGA CAAGACCCCC GCGCAACCCG GCGCCCCGAT CCTGACCGTG
GACGACCTGC GCGTGGTGGA CGACCAAGGC GTCGAACGGG TCAAGGGCAT CTCGCTGCAG
GTCCGCGCCG GCGAGGTGCT GGGCATCGCC GGGGTCGCCG GCAACGGGCA GTCCGAACTG
CTCGAGGTGC TGGGCGGCAT GCGCCCCGCC ACGGGCCGCG TCACCGTCAG CGGCCAGCAG
ATCGACCTGA CCGGCAAGCA TTCCAACGGC AAGACCCGGC GCGCCCAGGG CATTGCCCAT
GTGCCCGAGG ACCGGCAGGC CGAGGGTCTG ATCATGGACT ACCACGCCTG GGAAAACGTC
GCCTTCGGCT ACCATGATGA CCCGGCCTAC AATCGCGGCC TCCTGATGGA CAACCGCGCC
GTGCGCGCCG ATGCCGAGGG CAAGATCGCC CGCTTCGACG TGCGCCCGGC CGATTGCTGG
CTGGCGGCCA AGAACTTCTC CGGCGGCAAC CAGCAGAAGA TCGTGCTGGC CCGCGAGATC
GAGCGCAATC CCGAGCTGCT GCTGGTCGGG CAGCCCACCC GCGGCGTGGA TATCGGCGCG
ATCGAATTCA TCCACCAGCA GATCATCGCC CTGCGCGATG CGGGCAAGGC GATCCTGCTG
GTCTCGGTGG AGCTGGAGGA AATCCTGTCG CTCTCGGACC GGGTCGCGGT GATGTTCGAC
GGGCGCATCA TGGGCGAACG CCCCGCCGCC GAGACCAACG AGAAGGAGCT GGGCCTGCTC
ATGGCCGGGA TCACCGAACC GCCCACCGAC AAACCCCTGA TCCAGGTGGT CGAGGAAAAC
CTCGCCGCCG CCGCGGAGCA CAGCTGA
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| Protein sequence | MRAGHPPRAG LTNGVGSMSD TQAPAIELRG ISKAFGPVQA NKDISIRVMP GTIHGIIGEN
GAGKSTLMSI LYGFYKADAG EIFIKGQKTE IPDSQAAIRA GIGMVFQHFK LVENFTVLEN
VVLGAEEGAL LRPSLAKARK LLRELSEEYE LNVAPDALIE DLSVGHQQRV EILKALYRKA
DILILDEPTG VLTPAEADHL FRILEGLKAE GKTIILITHK LREIMETTDT VSVMRRGEMT
ATVKTADTSP EQLAELMVGR KVLLRVDKTP AQPGAPILTV DDLRVVDDQG VERVKGISLQ
VRAGEVLGIA GVAGNGQSEL LEVLGGMRPA TGRVTVSGQQ IDLTGKHSNG KTRRAQGIAH
VPEDRQAEGL IMDYHAWENV AFGYHDDPAY NRGLLMDNRA VRADAEGKIA RFDVRPADCW
LAAKNFSGGN QQKIVLAREI ERNPELLLVG QPTRGVDIGA IEFIHQQIIA LRDAGKAILL
VSVELEEILS LSDRVAVMFD GRIMGERPAA ETNEKELGLL MAGITEPPTD KPLIQVVEEN
LAAAAEHS
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