Gene Dshi_2841 details

Gene Information

• Locus tag: Dshi_2841
• ID: 5710692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dinoroseobacter shibae DFL 12
• Kingdom: Bacteria
• Replicon accession: NC_009952
• Strand: +
• Start bp: 2998568
• End bp: 2998987
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 75%
• IMG OID: 641268767
• Product: putative ribosomal-protein-alanine acetyltransferase
• Protein accession: YP_001534175
• Protein GI: 159045381
• COG category: [R] General function prediction only
• COG ID: [COG0456] Acetyltransferases
• TIGRFAM ID: [TIGR01575] ribosomal-protein-alanine acetyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.000949861
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCCGG CGCAGATGGC CACGCTCCAC GCGGCCTGCT TCACCACCCC GCGCCCCTGG 
ACCGAGGCGG AGATTACCGA AACCCTCGCG CGCCCGGGCA GTTTCACCAT CACCGCCCCC 
CATGGCTTCG CCCTGGCCCA GGTCGCCGGT CCAGAGGCGG AGCTTCTGAC CCTCGCCATC 
GCCCCCGCCG CCCGCAGGCA AGGCATCGCG CGCGCGCTCA TGGCCCGGTT CCACGCCACC 
GCCCGGGCCC GGGGCGCGCA GGAGGCCTTT CTCGAAGTGG CCGCGGACAA CACCGCCGCG 
CGCGCCCTCT ATGCCCGGCT CGGCTATGCC CAGGCAGGCC GTCGCAAGGG CTATTACCGC 
GGCCCGGACG GGGCGCGGCA GGACGCGCTC GTGCTGCGCC GCCCCCTGCA CGACAGCTGA 

 

Protein sequence

MTPAQMATLH AACFTTPRPW TEAEITETLA RPGSFTITAP HGFALAQVAG PEAELLTLAI 
APAARRQGIA RALMARFHAT ARARGAQEAF LEVAADNTAA RALYARLGYA QAGRRKGYYR 
GPDGARQDAL VLRRPLHDS