Gene Dshi_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2799 
SymbolfccB 
ID5713699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2957464 
End bp2958732 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content66% 
IMG OID641268725 
Productsulfide dehydrogenase [flavocytochrome c] flavoprotein chain 
Protein accessionYP_001534133 
Protein GI159045339 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.346372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC TTTCAAGACG CCACTTCATC GCCACCAGCG CCGCCGTATC GGCCAGCCTC 
GCGGCGCCCA TGGTGCGCGG CCAGGGTCGC CCGCGCGTGG TCGTGGTCGG CGGCGGCTCC
GGCGGGGCCA CGGCAGCGCG CTATATCGCC AAGGACAGCC AGGGCGCGAT CGACGTCACC
CTGATCGAGC CCCAGCGCAC CTATTTCACC TGCTACTTCT CGAACCTCTA TATCGGCGGG
TTCCAGGACT ATGACGATCT GGGCCATTCC TATGGCAAGC TTGCGTCCGA GTACGGGATC
AACGTGGTCC ATGACTGGGC CATTGGCGTG GACCGGGACG CCAAGACCGT GGCGCTGGCG
GGCGGCGGCT CGGTCCCCTA TGACCGCCTG ATCCTCAGCC CCGGCATCGA CTTCAAGGAC
GGCGCGATCC CCGGCTGGGA CCTGGCGGCC CAGAACGCGA TGCCCCATGC CTACAAGGGC
GGGACGCAAG CGCAGCTGCT CAAGGCGCAG ATCATGGCCA TGCCCGAGGG CGGCACCTAT
GCCATGGTCG CGCCGCCCAA CCCCTATCGC TGCCCGCCCG GACCCTATGA GCGGATCTCG
ATGGTGGCCC ATGCCCTGAC CCAGATGAAC CCGACCGCCA AGATCCTGAT CGTCGACCCG
AAGGAGAAAT ACTCCAAACA GGCGCTGTTC GAGGAAGGCT GGCAGAAGCA CTATGCCGGC
ATGGTTGAAC GGATCGGCCC GGATTTCGGC GGCGACAAGG TCGAGGTCCG GCCCGACGCC
ATGGAGGTCG TGGTCGACGG GGTGGTCGAG AAGGTCGATG TCTGCAACGT GATCCCGGCC
CAGAAGGCCG GTCGCATCGC CGAGCTTGCG GACCTGACCA ACGAGGAAGG TTGGGCGCCG
GTGGTGCCCG CGACGATGCA GAGCCGCGAG GACGAGAATA TCCATGTGCT CGGCGATGCC
AGCCAGCAGG GCGACATGCC CAAATCCGGC TACTCCGCCA ACAGCCAGGC CAAGGTCGCG
GCCATGGCCG TGCGCGGCGC GCTCACCGAC AGCCGCGTGT TCCCGGCGAA GTTTTCCAAC
ACCTGCTGGT CGCTGATCGC CACCGAGGAC GGGGTGAAGG TGGGCGCGTC CTACGAGGCG
ACGGAGGAGA AGATCGCCAA GACCTCCGGC TTCATCTCCA ACACCGGGGA GGATGCGGCG
CTGCGCAAGG CCACCTACGA GGAAAGCCTC GGCTGGTACG CGGGCATCAC GACTGACATG
TTCGGCTGA
 
Protein sequence
MTALSRRHFI ATSAAVSASL AAPMVRGQGR PRVVVVGGGS GGATAARYIA KDSQGAIDVT 
LIEPQRTYFT CYFSNLYIGG FQDYDDLGHS YGKLASEYGI NVVHDWAIGV DRDAKTVALA
GGGSVPYDRL ILSPGIDFKD GAIPGWDLAA QNAMPHAYKG GTQAQLLKAQ IMAMPEGGTY
AMVAPPNPYR CPPGPYERIS MVAHALTQMN PTAKILIVDP KEKYSKQALF EEGWQKHYAG
MVERIGPDFG GDKVEVRPDA MEVVVDGVVE KVDVCNVIPA QKAGRIAELA DLTNEEGWAP
VVPATMQSRE DENIHVLGDA SQQGDMPKSG YSANSQAKVA AMAVRGALTD SRVFPAKFSN
TCWSLIATED GVKVGASYEA TEEKIAKTSG FISNTGEDAA LRKATYEESL GWYAGITTDM
FG