Gene Dshi_2791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2791 
Symbol 
ID5713691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2950066 
End bp2950944 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content70% 
IMG OID641268717 
Producthypothetical protein 
Protein accessionYP_001534125 
Protein GI159045331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.165544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.615822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC GGTTCGGCGG CAAATACAGC CCCGGCGGGT CGGGCGACCA GACGCCGCCC 
GTGGCCCCGG TGGCCCATGC GCGCCGCTCC AGGGTGGGCG CGCGGGTCAA TGCGCTGTTT
TTCCTGCCGC TTCCTCTCGG GTTCACGGCC TTTGGCAAAC CCGCGGCCGA GATGTCCTAC
AGCATCGGGG GGCTGGTCCT GTTGCTGGGC GCGGCCTGGA TGCTGCGCGA GGGGCTTCTG
GCCGAGGAGG CCTATGACGC GCGCAAGGTG GCCAAGCGCC CGGCGATCCC GCGCAAGATC
TTTGCCGCGG TGATGTGCGG CGTGGGGCTG GCCTTTGCCG GGCTGTCCAA CGGGGTCGGC
GCGATGGGCG CGGGGCTGTT CGCGGCGCTC GGCGCGGGGC TGCACCTGGC GGCCTTCGGG
ATCGATCCGC TGCGCGACAA GGGGGCGGAG GGGGTCGATG CCTTCCAGAC CGAGCGCGTG
GCGCGGGTGG TGGACGAGGC GGAGGCCTAT CTCAAGGCGA TGTCGGATGC GATCCTGCGG
TCCGGCGACC GGCAGCTGGA GGTCAAGGTC GAGGCGTTCA AGGCCACCGC GCGGGAGATG
TGCCGCCAGG TGGAGGAAGA CCCGCGTGAC CTGACCGCGG CGCGGAAATA CCTGGGCGTG
TATTTGATGG GCGCGCGGGA CGCGACGGTG AAGTTCGCCG ATCTCTATGC CCGCAACCGC
GATGCCAGCG TGCGCGCGGA TTATGTCGCC TTGCTCGACG ATCTGACCGC GAATTTCACC
GCGCGCAGCC AGGCGATGCT GCTCGATGAC CGCTCGGACC TCGATGTGGA GATCGAGGTG
CTGCGCGACC GGCTCGCCCG CGAAGGTGTG CGGGCCTGA
 
Protein sequence
MSQRFGGKYS PGGSGDQTPP VAPVAHARRS RVGARVNALF FLPLPLGFTA FGKPAAEMSY 
SIGGLVLLLG AAWMLREGLL AEEAYDARKV AKRPAIPRKI FAAVMCGVGL AFAGLSNGVG
AMGAGLFAAL GAGLHLAAFG IDPLRDKGAE GVDAFQTERV ARVVDEAEAY LKAMSDAILR
SGDRQLEVKV EAFKATAREM CRQVEEDPRD LTAARKYLGV YLMGARDATV KFADLYARNR
DASVRADYVA LLDDLTANFT ARSQAMLLDD RSDLDVEIEV LRDRLAREGV RA