| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2735 |
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| Symbol | hflC |
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| ID | 5713634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2896241 |
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| End bp | 2897134 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641268660 |
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| Product | protein hflC |
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| Protein accession | YP_001534069 |
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| Protein GI | 159045275 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0491808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0307139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG GACCCATTGG CCTGATCGCC CTGGCCGTCG TCGGCTTCGT TGCGATCAAC
TCGGTCTTTA TCGTGGACGA ACGCGAAAAG GCCCTGGTGC TGCAGTTCGG TCAGATCAAG
GCCGTGAAGG AAGAGCCCGG ACTCGCGTTC AAAATCCCGT TCATCCAGGA AGTCGTGCGC
TATGATGACC GGATCCTGAG CCTCGATACA CAGCAGATCG AAGTCACGCC TTCGGATGAC
CGGCGCCTCG TGGTCGACGC GTTCGCGCGC TACCGGATCG CGGATGTGGT TCAGTTCCGG
CAGGCGGTCG GTGTCGGCGG CATGCGGGCG GCCGAGCAGC GGCTCGAAGG CATCCTGAAC
CCGCAGATCC GGGCCGTTCT TGGTTCGGAC GGGGTGACGT CGAACACCAT CCTTTCGGCG
GATCGTGGCA CGCTTGCCGC GCGGATCACT GCCGGGGTGC GCAGCCGTGC GGCGGATATC
GGGCTGGAGG TTGTCGACGT GCGGCTCAAG CAGACCAACC TGCCCACCCA GAACCTCGAC
GCGACCTTCG CGCGGATGCG GGCGGAACGG GAACGGGAGG CCGCGGACGA GATCGCGCGC
GGTGAAGAGG CCGCACAGCG GGTTCGCGCC CAGGCCGACC GGACCGTGGT CGAACTGGTG
TCCGAGAGCC AGAAGGAAGC GGACATCACC CGAGGTGAGG CCGACGCCCG TCGGAACGCC
ATCTTCGCGG CGGCGTTCGG GGCCGACCCT GACTTCTTCG AGTTCTATCG CTCGATGACC
GCCTATGAGC GTGCGCTGCA GGGCAACAAT TCCACCATGG TGATCGCGCC GGACAGCGAG
TTCTTCGACT ATCTCGACGG CTCTGACGCC GTGTCGGGGC GTCCTGTCCC GTAA
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| Protein sequence | MKKGPIGLIA LAVVGFVAIN SVFIVDEREK ALVLQFGQIK AVKEEPGLAF KIPFIQEVVR
YDDRILSLDT QQIEVTPSDD RRLVVDAFAR YRIADVVQFR QAVGVGGMRA AEQRLEGILN
PQIRAVLGSD GVTSNTILSA DRGTLAARIT AGVRSRAADI GLEVVDVRLK QTNLPTQNLD
ATFARMRAER EREAADEIAR GEEAAQRVRA QADRTVVELV SESQKEADIT RGEADARRNA
IFAAAFGADP DFFEFYRSMT AYERALQGNN STMVIAPDSE FFDYLDGSDA VSGRPVP
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