| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2714 |
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| Symbol | psd |
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| ID | 5713613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2875527 |
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| End bp | 2876204 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641268639 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001534048 |
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| Protein GI | 159045254 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.701165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATGA CCGACACCTT CATCAAGCCG ATGCATCCCG AGGGCCGCAA GTTCGTGGCG
ATTTTCGGGG CCATTGCCCT CGCGCTCTTC ATCGTGTGGG AGCCTCTGGG CTGGATCGGG
GTCGGTGCGA CGGTGTGGTG CTACTATTTC TTCCGCGACC CCGAGCGGGT GACGCCGCAG
CGCGACGGGC TGGTGATCAG CCCCGCGGAC GGGGTCGTCT CGCTGATCGA GCAGGCCGTG
CCCCCGGCGG AGCTGGGCAT GGCCGACACC CCCCTGACCC GGGTCAGCGT CTTCATGAAC
GTGTTCAACT GCCACGTGAA CCGCACGCCC GTGCCCGGGA CGGTGAAGGC CGTGGCCTAC
CGGCCGGGCA AGTTCCTCAA CGCCTCGCTC GACAAGGCCA GCGAGGATAA CGAGCGCAAC
TCGATCTGTG TCGAGATGGC CGATGGCCGC CAGATCGCCA TGGTGCAGAT CGCGGGGCTG
GTGGCCCGGC GCATCGTCAG CTTCGTCAAG GGCGGCGAAA CCCTCGCGGC CGGCGAGCGG
TTCGGTCTGA TCCGCTTCGG CAGCCGCGTG GATGTCTACC TGCCCCAGGG CGTGCAGCCA
CTGGTCTCGG TCGGGCAGAC CATGGTCGCG GGCGAAACCG TGCTGGCGGA GCTGGGCGCC
GGAGGCCGCG CAGCATGA
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| Protein sequence | MRMTDTFIKP MHPEGRKFVA IFGAIALALF IVWEPLGWIG VGATVWCYYF FRDPERVTPQ
RDGLVISPAD GVVSLIEQAV PPAELGMADT PLTRVSVFMN VFNCHVNRTP VPGTVKAVAY
RPGKFLNASL DKASEDNERN SICVEMADGR QIAMVQIAGL VARRIVSFVK GGETLAAGER
FGLIRFGSRV DVYLPQGVQP LVSVGQTMVA GETVLAELGA GGRAA
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