| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2708 |
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| Symbol | |
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| ID | 5713607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2869501 |
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| End bp | 2871093 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268633 |
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| Product | sensor hybrid histidine kinase |
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| Protein accession | YP_001534042 |
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| Protein GI | 159045248 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.752029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGG CAACGCTCAA GGGGCTTGAC GACCACGCCG CGAACCCGTT CCTCGAGTTC
TTCGGCAAGG CGCCTGTACT GATGCATTCT GTGGATCGGG ACGGCGTCAT CGTGGCGATC
AGCGCCTATT GGGCGGCCCG GCTCGGCTAC AGCCCCGATG ACATGATCGG CCGGTCGATC
ATGGAGTTCA TGGTACCCGA ATCGGCGAAC CGTGCCCGGA CCGAGGTCAT GCCGACCCTG
CTGCGGACAT CTTCGGTGGA CAAGATCCGG CACACGTTCC TGCGCCAGGA CGGCACGCCG
TTCCACGCCC TTGTCTCGGC CGTGGTGCTG CGCGACGCGG ACGGCGCCTT CCTGCGCACC
CTGTCGATTG TCAGTGCCGA TGACGGGACG GACGGGCTGC AGCAGGACCT GCAGGCCGCC
CTGATCAGGG CCGAGGATGC CAGCCGCGCC AAGAGCCGGT TCCTGGCCGC CATGAGCCAC
GAGATCCGCA CCCCGATGAA CGCCATTCTC GGTTTTGCGC AGCTGTTGCG GCTGTCGGAC
CTGGACGAGA AGCGGCGCGG CCATGTGGAT GCGATCATCG CGGCGGGCGG GCAGTTGATG
AACCTGCTGA CCGACCTGCT GGATCTGAGC CACATGGAAA CCGGGCGCAT GCGGATCGAA
AGCCGCGCGA CGGACCTGAT GCCGCTTTTG GACCAGGTGG CGGACTGGTG GTACAGCTCG
GTCAGCGAGA AGGGCCTGAC CCTGCAGGTC GAGATCGACG ACCGGATGCC GGCCCGTGTG
CTGACCGACC CGGTGCGGCT GCAACAGGTG CTCAACAACT TCATGGCCAA CGCCCTGCGC
TATACCGACC GGGGCACGAT CACCCTGCGT GTGCGGGAAA TCAGCCGCAG CGACAGCTTC
TCGCGCCTGC GGCTGGAGGT CGAGGATACC GGGATCGGGA TCTCGGAAGA GCAGCAGGCG
TTGCTGTTCC GGCCCTTCGT GCAGATCGAG AGCGATTTCG GCAAGGATCG CGGCGGCTGG
GGCCTTGGCC TGTCGATCTG CCACAACATC GCCGCGGCCA TGAGCGCCGA TATCGGCGTG
ACCTCGCAGC CCGGCGCGGG CGCGACCTTT CATTTCGAGC TGACGCTGCC GCTGGAGCCC
TGCCCCGAGC CGCGCGAGAC CCCACAGCCC CATCCCGCCC GGGCGCCCCG GGGGCCGTCG
GCCAAGGTGC TGGTGGCCGA GGACAATCCG CTGAACCAGA ACGTGATGGA GGCGATGCTG
CGCGATCTCG GGCACGAGGT GCGCGTGGTC TCCAACGGGT TCGAGGCGGT CGAGGCGATC
CTGTCGGAGA GTTTCGACCT GGTGTTGATG GACATCACCA TGCCCGGGCT TGACGGGTTG
GGGGCGACGG CGCAGATCCG CACCTCGGGG CCGGAAAAGA GCAAGGTGCC GATCATCGCC
TGCACCGCCC ATGTGGGCGG CGACGTGCAG GCGCGCTACC GCGATGCGGG GATCGACGGG
TTCCTGCCCA AGCCGGTGGA CCCGCGCGCC CTGGAAGCCG CGATCAACAG CGCCGTCTCG
GGCGGCGCCT TCTCGCACGG TCCCGGAACC TAG
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| Protein sequence | MPEATLKGLD DHAANPFLEF FGKAPVLMHS VDRDGVIVAI SAYWAARLGY SPDDMIGRSI
MEFMVPESAN RARTEVMPTL LRTSSVDKIR HTFLRQDGTP FHALVSAVVL RDADGAFLRT
LSIVSADDGT DGLQQDLQAA LIRAEDASRA KSRFLAAMSH EIRTPMNAIL GFAQLLRLSD
LDEKRRGHVD AIIAAGGQLM NLLTDLLDLS HMETGRMRIE SRATDLMPLL DQVADWWYSS
VSEKGLTLQV EIDDRMPARV LTDPVRLQQV LNNFMANALR YTDRGTITLR VREISRSDSF
SRLRLEVEDT GIGISEEQQA LLFRPFVQIE SDFGKDRGGW GLGLSICHNI AAAMSADIGV
TSQPGAGATF HFELTLPLEP CPEPRETPQP HPARAPRGPS AKVLVAEDNP LNQNVMEAML
RDLGHEVRVV SNGFEAVEAI LSESFDLVLM DITMPGLDGL GATAQIRTSG PEKSKVPIIA
CTAHVGGDVQ ARYRDAGIDG FLPKPVDPRA LEAAINSAVS GGAFSHGPGT
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