| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2699 |
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| Symbol | |
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| ID | 5713598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2859820 |
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| End bp | 2860515 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641268624 |
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| Product | putative high-affinity branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001534033 |
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| Protein GI | 159045239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.834948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAACA TCGACAATAT CGACCTCCAT TATGGCGCGG CGCAGGCCTT GCGCGGGGTC
TCCATTTCCG CCGAGCCGGG CAAGGTCACC ACCGTGCTGG GCCGCAACGG GGTGGGCAAG
ACCACGCTCC TGCGCGCCAT CACGGGTCGA CAGCCGATCT CGGCGGGCCG GATGGATTGG
GAAGGCACCG ATTTGTCGAC CCTGCGCGCC GATGCCCGCG CCCGCGCCGG GATCGCCTCG
GTCCCCCAGG GGCGGGAAAT CTTCCCACTG CTGACGGTGC AGGAGAACCT GGAAACCGGC
TTCGGCGCTT TGCCCCGCGC CCTGCGCCAC GTCCCGGACG AAGTGTTCAC CCTGTTCCCG
GTGCTCAAGG ACATGCTGGG TCGCCGTGGC GGAGACCTGT CGGGCGGGCA ACAACAGCAG
CTTGCCATCG GTCGGGCGCT GGTGATGCGG CCGCGCCTCT TGGTACTCGA CGAGCCGACC
GAGGGCATCC AGCCCTCGAT CATCCAGGAT ATCGGCCGCG CGATCAGCTA CCTGCGCGAC
CGGGGCGACA TGGCGATCTT GCTGGTGGAG CAGTACTTCG ACTTCGCCCG CGACCTCTGC
GACAGCTTCG CTGTGATGGA TCGCGGTCAG ATCGTGAAAT CCGGCACGCG CGACTCCATG
GATGAGGCAG AGCTGCGCGG CCTTCTGACG GTGTAA
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| Protein sequence | MLNIDNIDLH YGAAQALRGV SISAEPGKVT TVLGRNGVGK TTLLRAITGR QPISAGRMDW
EGTDLSTLRA DARARAGIAS VPQGREIFPL LTVQENLETG FGALPRALRH VPDEVFTLFP
VLKDMLGRRG GDLSGGQQQQ LAIGRALVMR PRLLVLDEPT EGIQPSIIQD IGRAISYLRD
RGDMAILLVE QYFDFARDLC DSFAVMDRGQ IVKSGTRDSM DEAELRGLLT V
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