| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2698 |
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| Symbol | |
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| ID | 5713597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2859081 |
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| End bp | 2859818 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268623 |
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| Product | putative high-affinity branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001534032 |
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| Protein GI | 159045238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.358687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC AGCTTTCCCT CAACGGCGTG AACCGCAGCT TCGACGGGTT CAAGGCAATC
AACAACCTCA GCCTCACGGT CGAGAAGGGC GAGTTACGCG CCATCATCGG CCCCAACGGC
GCGGGCAAGA CCACGATGAT GGACATCATC ACCGGCAAGA CCCGGCCCGA CGAGGGCGAG
GTTCTGTGGA ACCAGACCGT GGACCTGACC CGCACCGACG AGGCCGACAG CGCCAATCTC
GGCATCGGGC GCAAGTTCCA GAAACCCACC GTGTTCGAAA CCCACACCGT GGCCGACAAC
ATCGCGCTCA GCCTGAAGGC AGACCGGGGC ATCTGGGCCA CGCTCTTCAA CCGGCGCACC
GCCGCCGAGG AGGCGCGGAT CACCGAGCTG CTCGAACTGG TCAAACTCGA CGGTGACCGC
GACCGGCTGG CCGCCGACCT GAGCCATGGC CAGAAGCAGT GGCTGGAGAT CGGGATGCTG
CTCGCCCAGG ACCCGGAACT CTTGCTGGTG GACGAACCTG CTGCGGGCAT GACCGACGCC
GAGACCATGC GCACCGCCGA GCTTCTGCGC GGTATCGCGG GCAAGCACAC GGTGATCGTG
GTCGAACACG ACATGGATTT CGTCCGCGCG CTTGACTGCC GTGTGACGGT GCTGCACCAG
GGCCATGTGC TGGCCGAAGG CTCGCTGGAC CATGTCTCCG CCAACCCACA AGTCATTGAA
GTCTATCTGG GCCGCTAA
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| Protein sequence | MSIQLSLNGV NRSFDGFKAI NNLSLTVEKG ELRAIIGPNG AGKTTMMDII TGKTRPDEGE
VLWNQTVDLT RTDEADSANL GIGRKFQKPT VFETHTVADN IALSLKADRG IWATLFNRRT
AAEEARITEL LELVKLDGDR DRLAADLSHG QKQWLEIGML LAQDPELLLV DEPAAGMTDA
ETMRTAELLR GIAGKHTVIV VEHDMDFVRA LDCRVTVLHQ GHVLAEGSLD HVSANPQVIE
VYLGR
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