| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2660 |
|---|
| Symbol | |
|---|
| ID | 5713558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2817800 |
|---|
| End bp | 2818288 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641268584 |
|---|
| Product | putative carbon monoxide dehydrogenase |
|---|
| Protein accession | YP_001533994 |
|---|
| Protein GI | 159045200 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.175738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTG TAACGATGAC CGTGAACGGC AAGGCCCGCT CCGGCGAGGT GGAGGGGCGC
ACGCTGTTGT CGTCGTTCCT GCGCGACCAG CTGCACCTGA CGGGCACCCA TGTGGGCTGC
GATACCAGCC AGTGCGGCGC CTGCGTGGTG CATGTGGACG GCGAGGCGGT GAAGGCCTGC
ACGGTGCTGG CGGCGGACGC GGACGGGGCC GAGGTCACGA CCATCGAGGG CATGGCGAAT
GCGGATGGCT CGCTGTCGGC GATCCAGGCG GCGTTCCAGG AGCATCACGG GCTGCAATGC
GGGTTCTGCA CGCCGGGCAT GGTGATGTCG GCGGCGGCGC TGCTGAAGGA CAACCCCAAG
CCGAGCGAGC ACGAGATCCG CGAGTATCTC GAGGGCAATA TCTGCCGCTG CACCGGCTAC
CACAACATCG TCAAGGCGAT CCTGGCGGCC TCGGGCCAGC AGGTCGCGCC GCCGATGGCC
GCGGAATAA
|
|---|
| Protein sequence | MTSVTMTVNG KARSGEVEGR TLLSSFLRDQ LHLTGTHVGC DTSQCGACVV HVDGEAVKAC
TVLAADADGA EVTTIEGMAN ADGSLSAIQA AFQEHHGLQC GFCTPGMVMS AAALLKDNPK
PSEHEIREYL EGNICRCTGY HNIVKAILAA SGQQVAPPMA AE
|
|---|
| |