| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2637 |
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| Symbol | |
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| ID | 5713535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2792408 |
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| End bp | 2794051 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641268561 |
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| Product | putative anaerobic magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase |
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| Protein accession | YP_001533971 |
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| Protein GI | 159045177 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | [TIGR02026] magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.166489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG TTTTCGTCCA CCCAAATTAT CATTCCGGCG GCGCCGAGAT TGCCGGCAAC
TGGCCACCGG CCTGGGTGGC CTATCTCGCC GGGTCGCTGA AGGCGGCCGG TTTCGACGAC
ATTCACTTCC TCGATGCCAT GACCAACCAC ATGCCCGACG AGGATCTCCG GGCAAAGCTC
GCAGAACTGC AGCCCGATAT CGTCGGCACC ACCGCGATCA CCCCCGCGAT CTACGAGGCT
GAAAAGGTTC TGAAAATCGC GTCCGAGGCC TGCCCCGACG CGGTGCGCCT GCTGGGTGGG
ATCCACGGCA CCTTCATGTA CAAGCAGGTG CTGGCCGAGG CCCCCGAGGT CGAGGTGATC
ATCCGCGGCG AAGGCGAAGA GATCATGGTC GAACTGGCCC GCTGTGTCGC CGAGGGGCGC
TGGCCCGAGG ATCAGCGCAA GATCAAGGGG CTGGCCTTCC GCGAGGGCGA TCAGATCGTC
GCGACCCAGG CCGCAAGCAC GGTCAAGGAC CTGGATGGAA TCAACCCGGA CTGGTCGCTG
CTGGAATGGG ACAAGTACAT CTATGTCCCC CTGGGCGTGA AGGTCGCGAT CCCGAACATG
GCGCGCGGTT GCCCGTTCAC CTGTTCGTTC TGCTCGCAGT GGAAATTCTG GCGCGACTAC
CGTGTCCGGG ACCCGATAAA GGTCGTGGAC GAGATCGAGA ACCTGGTCGA CAATCACGGC
GTCGGTTTCT TCATCCTCGC GGACGAGGAA CCCACCATCA ACCGGCGCAA GTTCATCCAG
TTCTGCGAAG AGCTGATCGC GCGCGGCCTG CCCGAGAAGA TCCAGTGGGG CATCAACACC
CGCGTGACCG ACATCATGCG CGACAAGGAG CTGTTGCCGC TCTATCGCAA GGCCGGTCTC
GTCCATGTCA GCCTCGGCAC CGAGGCCGCT GCGCAGCTCA AGCTCGACCA GTTCAACAAG
GAAACCAAGG TCGAGGAAAA CAAGGAGGCG ATCCGACTGC TGCGCGAGGC CGACATCTTC
ACCGAGGCGC AGTTCATCGT GGGTCTCGAC AACGAGACGG CGGAGACGCT GGAGGAAACC
TTCCAGATGG CCTGGGACTG GCAGCCGGAC CTCGCCAACT GGGCAATGTA CACGCCCTGG
CCCTTCACCC CGCTCTTCCA GGAACTGGGT GACAAGGTCG AGGTCTTCGA CTTCTCGAAA
TACAACTTCG TCACGCCGAT CATGGCCCCC GATGCCATGA CCCGGGGCGA GCTGTTGGAC
GGGGTGATGA AGAACTACCG CCGGTTCTAT TCCCGCAAGG CGCTGTTCCA CTATCCGTGG
CGCGGCACGG GCTACCGGCG AAAATACCTG CTGGGCTGTC TCAAGGCCTT CCTCAAGGCC
GGGTTCGAAC GCAAGTTCTA CGATTTGGGC AAGGCGAATT ACTGGGGCCC GCAATCCAAG
GACAAGGTCA ATTTCAACTT CGACCGGACC CGGAAGATCG CCAAGGCCCA GATGGACGAC
TGGGAGGCCG CCGCCGACCG CGCGTCTCAG GCCAAGGCCC GACGCAAGGC GCTCGACACC
TCCTTCAAGC TGCCCGAGGG CCATGAGAAG CGTGAACCGA TCAAGGCCTG TGGCGGGGGC
TCGCAGCAGA TGGAAGATGT CTGA
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| Protein sequence | MRIVFVHPNY HSGGAEIAGN WPPAWVAYLA GSLKAAGFDD IHFLDAMTNH MPDEDLRAKL
AELQPDIVGT TAITPAIYEA EKVLKIASEA CPDAVRLLGG IHGTFMYKQV LAEAPEVEVI
IRGEGEEIMV ELARCVAEGR WPEDQRKIKG LAFREGDQIV ATQAASTVKD LDGINPDWSL
LEWDKYIYVP LGVKVAIPNM ARGCPFTCSF CSQWKFWRDY RVRDPIKVVD EIENLVDNHG
VGFFILADEE PTINRRKFIQ FCEELIARGL PEKIQWGINT RVTDIMRDKE LLPLYRKAGL
VHVSLGTEAA AQLKLDQFNK ETKVEENKEA IRLLREADIF TEAQFIVGLD NETAETLEET
FQMAWDWQPD LANWAMYTPW PFTPLFQELG DKVEVFDFSK YNFVTPIMAP DAMTRGELLD
GVMKNYRRFY SRKALFHYPW RGTGYRRKYL LGCLKAFLKA GFERKFYDLG KANYWGPQSK
DKVNFNFDRT RKIAKAQMDD WEAAADRASQ AKARRKALDT SFKLPEGHEK REPIKACGGG
SQQMEDV
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