| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2587 |
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| Symbol | |
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| ID | 5713485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 2752527 |
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| End bp | 2753555 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641268511 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533921 |
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| Protein GI | 159045127 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00136385 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAGC CCCTCCTCAC CTTCACCGAC CGCGGCATCC ACTGCCCGGC GGGCGGCTTT
CACATCGACC CCTGGCGCCC CGTGGACCGG GCGCTGATCA CCCACGGCCA TGCCGACCAC
GCCCGTCCCG GCCACCGCGC CTATCTCGCG ACCGAGGCCG CGGCCCCCGT GATGCGCCAC
CGCCTCGGCG ACATCGCCCT CGACACCATC CGCTACGGCG AGACCCGGCG GATCGGCGCC
GTCGAGGTCA GCTTCCATCC CGCGGGCCAC GTCCCCGGCT CCGCCCAGAT CCGGATCGCC
CATCGCGGCG AGGTCTGGGT GGTCTCGGGC GACTACAAGA TCGACGCGGA CGGGTTTTCC
GAACCGTTCG AGCCCGTGCG CTGCCACGCC TTCATCTCCG AATGCACCTT CGGGCTGCCG
GTCTTCCGCT GGGACCCGCA GGACGATGTC ATGGCCGCCA TCCACCGCTG GTGGGCGACC
TGCGCCGCCG CGGGCAAGAC CGCCGTGCTC GGCGCCTACG CGTTGGGCAA GGCCCAGCGC
ATCCTCGCCC ACCTGGACCC CGCCCAGGGC CCGATCCTGA CCCATGGCGC GGTGGAGGGC
ACCAACCGCA TCCTGCGCGC CCAGGGACTC TCGCTGCCCC CAACGACCCA GGTCACCGCC
GAGATCACCG CGAAAACCCA CCCGGGCGCG CTGGTACTCG CCACACCCTC CGCCCTCGGC
ACGCCCTGGA TGAAACGCTT CGGGCCCGCC GAGACCGGCT TTGCCTCGGG CTGGATGCGG
ATGCGCGGGG TCCGGCGCCG ACGCGGCGCA GACCGGGGGT TTGTGATGTC GGACCACGCG
GACTGGACCG GGCTGAATAC CGCCATCGCC GAAACCGGGG CGGAACGGAT CTTCGTCACC
CATGGTTATA CCTCCGTCTT TGGCAAATGG CTGGAGGATC AGGGCTACGA CGCCCAGATC
GTCGAGACGG AATTCGAAGG CGAAAGCATC GACGCACCGG ATCCCGAGCC CGAAGGAGCC
GCCCCATGA
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| Protein sequence | MAEPLLTFTD RGIHCPAGGF HIDPWRPVDR ALITHGHADH ARPGHRAYLA TEAAAPVMRH
RLGDIALDTI RYGETRRIGA VEVSFHPAGH VPGSAQIRIA HRGEVWVVSG DYKIDADGFS
EPFEPVRCHA FISECTFGLP VFRWDPQDDV MAAIHRWWAT CAAAGKTAVL GAYALGKAQR
ILAHLDPAQG PILTHGAVEG TNRILRAQGL SLPPTTQVTA EITAKTHPGA LVLATPSALG
TPWMKRFGPA ETGFASGWMR MRGVRRRRGA DRGFVMSDHA DWTGLNTAIA ETGAERIFVT
HGYTSVFGKW LEDQGYDAQI VETEFEGESI DAPDPEPEGA AP
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