Gene Dshi_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2565 
Symbol 
ID5713462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp2730319 
End bp2730960 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID641268488 
Productresponse regulator protein 
Protein accessionYP_001533899 
Protein GI159045105 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000140338 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000000164026 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCAGAG TCCTGATCAT GTCGGATGTG CAGGTGTTTC GTGAGGGCTT GGCCATCGCG 
CTCTCGCAAA GTGGGGAGTT AGATGCGCGG CAGGCATCCT CCCGATCACA GGAGGCTTTG
CGGACCATTC GGCGGTCTGC CGCCGATGTC GCGCTTGTCG ACCTTCAGAT ATGTGAAGCC
ACCGATTTCA TGGCGGCCTT GTCCCGGGGA GCACCGGAGA CAGCCCTGAT CGCCATGGGT
GTCGACCGGG ACGGTGGCCA GATTCTCGAA TGCGCAGAGG CCGGGGCGCG GGGGTTCGTG
GCGCGGGACG CATCCCTGGC CGATCTCACC CGTGCCATTC ACGATGCGCG GGCGGGTGCC
CTGCGTTGCC AGCCCGAGGT GGCGCATATG CTCTTTTGCC ATGTTGGGCG GCTGAGGGCT
CGGCGCGAGG CGGAGCCCTG CGCGCAGCCC GGCATGCAAC TGACCCGGCG CGAGCGGGAA
ATCCTCGACC TGATCGAGCG GGGCAAGCCC AACAAGGTGA TCGCCTGTAC ACTGGGCATC
GAGGTCTCGA CGGTGAAGAA CCATGTCCAC AGCCTGCTGG GCAAACTGGG GGTCCGCCGC
CGAGGCGAGG CGGCCGCCCT GCATCGACGC AGATCGACGT AG
 
Protein sequence
MIRVLIMSDV QVFREGLAIA LSQSGELDAR QASSRSQEAL RTIRRSAADV ALVDLQICEA 
TDFMAALSRG APETALIAMG VDRDGGQILE CAEAGARGFV ARDASLADLT RAIHDARAGA
LRCQPEVAHM LFCHVGRLRA RREAEPCAQP GMQLTRRERE ILDLIERGKP NKVIACTLGI
EVSTVKNHVH SLLGKLGVRR RGEAAALHRR RST