| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2550 |
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| Symbol | |
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| ID | 5713447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2709454 |
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| End bp | 2713869 |
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| Gene Length | 4416 bp |
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| Protein Length | 1471 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641268473 |
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| Product | hypothetical protein |
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| Protein accession | YP_001533884 |
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| Protein GI | 159045090 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0217864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC AACTCAGCCA ATTCCCGACC AGCCTGCACC AGCCCTATTC CGGGGTCTTT
CAGCAGCAGG GCCGGATGAT CACCGATGCG GATTGGAACG CCGCGATGCA GGTCTCCAGG
GACAGGCTGG AGCGCGCGCT GGGCGATGTG ATCGGCACCG GCACGCCCGA ACAGGGGGGG
ATCATTGCCG GGGACGAAGC GAGCGGTTTT TCGATTGTCT GGGGCGATGT TTATGTCGAC
GGGCTCCGGG GCGTGCTGGC TTCCCGCAGC GGCGCGGCGG CCTTCGACCT CGCGGACCAG
GCCGATTTTC CCGGCGCGCC CGAGGCGCCA GAGGGGGCGC ATCGGCTCTA CCTCGATATC
TGGGAGCGGA GCCTCACCGC GCTGGAAGAG CCCCATCTGA TGGACGCCGC CCTGCATGGC
GCGGATACCT CCACGCGCAA GCGCGTAATG ACGCAGGTGA AGCTATGCCC GCAGGATTTC
GACCCCGAGG ATCCGGCGCA GAACCCGTCG ATCGGCGAGG GCCGCCTGGA TATGCGTCTG
CGCGCGGGCA CGGCCTCGCC GGACGCCTGC GAACCCTGTC TGGACGAGAT CGACGTCAGC
GGACGGGTAG GCAACTATGC CTTCCGGGTG GAGGTGCATG CGGTTGATCG CAACGCGGCG
GGCGCGCCGC GCCGCATCAC CCTGAAATGG TCGCGGGAAA ACGGTGCCGA AGCCGCCGTT
ATCGGTCAGG AACCGCCGGG GTTTCAGGCC TCGGACTGGA TCTACGAGTT CTATCATGCG
GCGTCCGAAG ACAGCCTGAG CGAGAGCCAC GCGGGTTTTC ACCATCCCGA GGTCATCGCG
GCCGGGTTCA CGCCGGCTGT GGGGGCGCTG GTGGAAGGCT ATCCGCAGGG GGCGCCGTCC
GCGGGGTTTT CCCTCGTGCG CCGCTGGGAC GGTTACGTCG TGCTGGAAAA GAACGGTGCG
ATCTGGGAGA TGGCGACACA GACCGTCGAC GGTGAGAGCG TGCCCTTCGG GGCCGATCGC
GGGCAGCGGC TGTCCACGGT TCTGGCCGAA GCCCAGCATG GCCATGTTTC CGAGGGCGCC
ACGATCCTGA TGTCGCTCGA CACCATGACT CTGCGGCTGG AGCTGGCCGA TCACCAGCAT
CTCGCAGGGG ATTACTGGAT CGGGACCGTG CGCGAGGCTC TGCACGGCGT CGGCGACGTG
ATACGGCAGG ACGCCACACC GGATGGTCTC CAGCATCATT ACATGTGTCT GGCAGATGTG
GCCGAGGACG GTACCTTCTG CCTGCTGAAC AAGGACGCCT GTAAACGCTT CCAGTTTCCG
CCCCTGACCA ACCTGCACGC GGACGATGTC TGCTACGACA ATACCGCCTG CGAAATGCCC
GGGGTCGAGA ACGTGCAGGA TGCGCTCGAC CACCTCTGTC GGCAGAAGGA CCTGAAATGG
CACAACAAGC ATCTCCATGG CTGGGGGATC GTGTGTGGCC TGATCGTGGA ATGCTGCCCT
GAGAACCCGG ACTCGGACGA GGATCCGTCG CAATGCGTGA CGGTGACCAA GGGATACGCC
ATCGATTGCG AGGGCTCGGA CATCATCGTC GAGGATCGTA TCCACGTGGA CCTGATGGAC
GCGGTGCGGG CCTGGGATGC CGAGAACCCG AATGCGCCGA TCCTGCAGGA GGGGCGCGGC
ACCGCGTGCC TGCACATCGC GCAAGTGGAT GGCGCGCCCA TGGTCCGGGT CGAACCCCAT
GAAGGCGGTG ACACCAGCGT TTTCGATCAG TTGATGGATG GCACGCTGCT GGGCGCTTTC
ATCCAGCATT GCATTCTCGA TCTGATCAAC GAGCTGAGCG AGGAGCTGTC CTTCATGGAG
GATGGCCAAC TCGCCGTGGA CGAGGACGGC GACGTGATCG TCAGCCAGGC GCGCCGCAAG
TTCATCAGCT TCGTCAACCT GGTGCAGCAG ATTTGGTTCA AGGACAACGG CCCCTATGTG
TGGCTGTCGC GGCGCGAATA CGACATCCTG CGCGAGCTCT ATGACCGGCT GCGCGCGCTG
ATCGGATCCA AGACATTCTG CGGGCTTCTC AACGCGGATG TCTTTCCCGA GTATCCTTTT
CCCGAGACCG AAATCGACAC CTGGTTCGGG GCGGACAACC ACACCCGCCT GAAGGCGGAT
CCGACCGGCG CGCGGGTCTA CACCTATGGC GGGACGGACG AAGCGATCCA TGTGTTCGAC
ACCGCCAAGG GCGAGTTGGT CGAAATCATC CGGGCGCCGA TCCCTTCAGG CGGTGAGGTC
ACGGCCATAG CGCTCAGCCC GGATGGGCAG TTGCTCTATG TTGCGGCGTC GGTGAATGGC
GAGGACACGG TGCTGGGCAT CGCCCAGGTC GGAGAGACCC ATGTGTTCGA GAAGCCGATG
CAGATCCTCT GCGGGATCAC GCTCTCGGAC ATGGAACTGG ACCCACGTGA CCCCAAGCTG
ATCTTTGCCA CGGGACCTGG TGCGGGGCTC TATGCGCTCC GGCCCGATGT GCTGTCGCAG
CAGGACAAGC CGCGGCCGGA CCCGGTCCAT GCCTTCAACG CGACGGGGCA GATGGCGGTG
GACACGGTCG CGCGGCGTAT CTTCTGTCCG GCGGCGGCGC CGGTAGACGG ACAAACGGCG
ACGGCGCCCC CGGTGGACTA TGACCGGGTG GCGGTCTGCG AGATGAACGA GACGGGCGGG
GGCGCGCCGC CTATGGTTGT TCTCGGCCAG CTCAGTGATC GCTTCGTTTC CGGCCGCGAT
GACATCGCCG TGCGTCCGGG CGATGACAGC CGGGTGTATC TGGTCGTCGA CGGGGTCGAG
CCGGCTGGGG ACAAGCAGAT CATCACTTTC GATGTCCCGA GGGCAGGTCC AGACCAGGCC
AAGTTGCAGG CACAGATTGC AGTCCAGAAC AGCCTGATCA GCCTGGGATT CGACCGGGGC
AGTGATACGC TCTATGCCAG CTTTGCAGAG AGCTTCCGCC TGCAGGCCAT CGCCGCCAAC
GGCACGGGTG TCATCCAGCC CCGCATCCCC GTGCAGCTCT GGCCGACGGG TATCGCGGTG
GGGCCGGAGG GCGATGTGCA GGTGGTCAAT GCGCTCTCCA GCACCGTAAC TTTCATTCCG
CGGGCCGAGG TGGCCCGGTC CGCCGATCGG CTGGCGCCGC TGGCCGAGAC ACGCTGGCGC
ATCCTGATGG CGTTCTATGC GCTGGTGGGA AACCTGTTTC AGTATCTCAA GGACTGCTTC
TGTCACCATC TGCTGGTGAA ATGCCCCGAA TGCGACGGGT CCGAGAAGAT CTATCTCGCC
TGTGTCGATA TCCGCGACGG CGCGGTCTTC AACATCTGCA ATTTCGGCAA ACGCAAATAT
GTGCAGACCT TCATGGCCTG GACCTATTGG CTGTCCCTGG TGCCGATCAT TCCCCTGATG
AAACAAGCGA TTGCCAAGGC ATGCTGCACT GTCTTGCCCA ATTTCCTCGA TCAGTTCTCG
GACGGCATCG CGCCGCCGCC AAAACCGCCG GAATTCGGGG CCGCCTCGGG CGTTTCCACA
CCGGTGAAGG CCAGCACGGG GCTGGTGGCG ATGCGGGCCT ACAAGCGGGC AGATGTGCCG
AGTTTCCAGC GGAGGCAGAT GGAGAAGCTC AATATCTATA CTGGCTTTGT CGGCGATGCG
GTTCTGTCCA CGGATACGCA GAAGTTCCTG GCCCCCCAAG GCGTTCGCAA GGAAAGCCTG
CAGAACAGCG CGACCGACGA CGCTCTGCGC AACCTGCAGG AGGCCGGGAT CGAGAACATC
GAGGTGCGGC CTTACGACCC CAAGCTGGCT GACCGCTACC TGTTGGATTT CGCGCGCACG
CCCAGTCGAC TGGACCCGAG CGCGAAGATC ATCGTCTATG AGCGGGACGG CAAGGCTGCC
TTCGTGGCCG AAGAGCGGAT CACGACAGTG ACGACACCGG CGCCCAAGCT CACCCCTGCC
GAGGAGGCGC GCATTGTCGA GCTGACCAGC CGGATCGAAA AGGCCAAGGA CACGTCGGCG
GCGGAGGAAG CCCTCGCCAA CCTGAAGCTG GAAACCGCCA AGATCGAGAC CGAGGTGGAT
GCCCTGCGTG TCATGCGGGA GGCGGAGGCC CAGAGCCTGG AGGCGCTCAA GATAGAGCGC
GACAGCCTCA AGACGGAACT GGAGGGGCTG CGCTCCGGTC TGGATGCGGT GGGTGAGATG
CAACGCAAGA TGAAGGTCGA TGTGGACAGC CTGCGACCGG TGACCGAGCT GGAAGGGGTC
TCGCGCGAGG TCGCGGCCCG GCTTGAACGT GCAGGCGTGC GGACGATCGG GGACCTGGCC
ACGGCGTCCA CCGCCAAGCT CAGAACGGCA GAAATCGGGC AGGACACGGC GGCGCGCAAG
GCCCTGATCG ACACCGCCAA GCTGCGGTTG CGCTAG
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| Protein sequence | MKTQLSQFPT SLHQPYSGVF QQQGRMITDA DWNAAMQVSR DRLERALGDV IGTGTPEQGG
IIAGDEASGF SIVWGDVYVD GLRGVLASRS GAAAFDLADQ ADFPGAPEAP EGAHRLYLDI
WERSLTALEE PHLMDAALHG ADTSTRKRVM TQVKLCPQDF DPEDPAQNPS IGEGRLDMRL
RAGTASPDAC EPCLDEIDVS GRVGNYAFRV EVHAVDRNAA GAPRRITLKW SRENGAEAAV
IGQEPPGFQA SDWIYEFYHA ASEDSLSESH AGFHHPEVIA AGFTPAVGAL VEGYPQGAPS
AGFSLVRRWD GYVVLEKNGA IWEMATQTVD GESVPFGADR GQRLSTVLAE AQHGHVSEGA
TILMSLDTMT LRLELADHQH LAGDYWIGTV REALHGVGDV IRQDATPDGL QHHYMCLADV
AEDGTFCLLN KDACKRFQFP PLTNLHADDV CYDNTACEMP GVENVQDALD HLCRQKDLKW
HNKHLHGWGI VCGLIVECCP ENPDSDEDPS QCVTVTKGYA IDCEGSDIIV EDRIHVDLMD
AVRAWDAENP NAPILQEGRG TACLHIAQVD GAPMVRVEPH EGGDTSVFDQ LMDGTLLGAF
IQHCILDLIN ELSEELSFME DGQLAVDEDG DVIVSQARRK FISFVNLVQQ IWFKDNGPYV
WLSRREYDIL RELYDRLRAL IGSKTFCGLL NADVFPEYPF PETEIDTWFG ADNHTRLKAD
PTGARVYTYG GTDEAIHVFD TAKGELVEII RAPIPSGGEV TAIALSPDGQ LLYVAASVNG
EDTVLGIAQV GETHVFEKPM QILCGITLSD MELDPRDPKL IFATGPGAGL YALRPDVLSQ
QDKPRPDPVH AFNATGQMAV DTVARRIFCP AAAPVDGQTA TAPPVDYDRV AVCEMNETGG
GAPPMVVLGQ LSDRFVSGRD DIAVRPGDDS RVYLVVDGVE PAGDKQIITF DVPRAGPDQA
KLQAQIAVQN SLISLGFDRG SDTLYASFAE SFRLQAIAAN GTGVIQPRIP VQLWPTGIAV
GPEGDVQVVN ALSSTVTFIP RAEVARSADR LAPLAETRWR ILMAFYALVG NLFQYLKDCF
CHHLLVKCPE CDGSEKIYLA CVDIRDGAVF NICNFGKRKY VQTFMAWTYW LSLVPIIPLM
KQAIAKACCT VLPNFLDQFS DGIAPPPKPP EFGAASGVST PVKASTGLVA MRAYKRADVP
SFQRRQMEKL NIYTGFVGDA VLSTDTQKFL APQGVRKESL QNSATDDALR NLQEAGIENI
EVRPYDPKLA DRYLLDFART PSRLDPSAKI IVYERDGKAA FVAEERITTV TTPAPKLTPA
EEARIVELTS RIEKAKDTSA AEEALANLKL ETAKIETEVD ALRVMREAEA QSLEALKIER
DSLKTELEGL RSGLDAVGEM QRKMKVDVDS LRPVTELEGV SREVAARLER AGVRTIGDLA
TASTAKLRTA EIGQDTAARK ALIDTAKLRL R
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