Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2471 |
Symbol | murE |
ID | 5713367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2622969 |
End bp | 2624450 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641268394 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001533806 |
Protein GI | 159045012 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.703083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAG GCTACGGGCC GAAATCGCTG GCGGAGCTGG GCTTCGCGGA ACGCGGGCGC CCGGTGACGG GGCTTGCGCT GGACAGTCGG CAGGTCAAGG AGGGCTACTT GTTCGCCGGC CTGCCCGGCA GCCGGGTGCA CGGGGCGGAA TTCATCCAGT ATGCGTTGCG CATGGGGGCG GGGGCGATCC TGACCGATGC GGAGGGCGCG CGGATCGCGC GCGATGTGCT CGACGGCGCC GAGGTCACCC TGATCGTGGC CGAAGACCCG CGCCAGGCGT TTTCCGCCGC GGCCGCCCTG TGGTACGGCG CGCAGCCCGC GACCATGGTC GGCGTGACGG GGACCAATGG CAAGACGTCC GTGGCGAGCT TCACCCGGCA GCTCTGGCAG GGGCTGGGCC ACGCGGCGGC CAATATCGGC ACCACGGGGA TCGAGGGGGA TTTTTCCGCC GATCTCGCCC ATACCACGCC CGATCCCCTG ACCCTGCATG CGGCGCTGGC CGAGATGGCC GCGCAAGGCA TCACCCACGC GGCGATGGAG GCGTCGTCCC ACGGACTCGA CCAGCGGCGG CTGGATGGCG TGCGGCTGGT GGCGGCGGGG TTCACCAATT TCAGCCAGGA TCACCTGGAC TATCACGAGA CGTTCGAGGC GTATTTTGCC GCCAAGGCGG GTCTGTTTTC GCGGGTGCTG GCCGATCAGG GCATGGCGGT GATCAACCTC GACGACCCGA AAGGCGCGGA CATGATGGCG ATTGCCCATG GGGCGGGGGC CGAGTTGCTG ACCGTGGGCA CGCACAAGGA CGCCATGCTG CGGCTGACCG CGCAGCGCTT CGATGCCGAC GGGCAGGAGA TGCGGTTCAC ATGGAAGGGC GTGGCGCACC AGGCGCGGCT CAACCTCGTG GGCGGATTCC AGGCCTCCAA CGTGCTGGTG GCTATGGGGC TCGTCATGGC CACGGGCGCG CAGGTCGGGG ATCTCGTACC GCTCCTGCCG CGGCTGGCCA CGGTGCGCGG CCGGATGCAG AAGGTCGCGC GTCGCGAGAA CGGCGCGACG GTCTTCGTGG ACTATGCCCA TACGCCCGAT GCGCTGAAAA CGGCGTTGCG CGCGCTCCGC CCCCATGTGC TGGGCCGTCT GGTGGTGGTG TTCGGCGCGG GCGGCGACCG GGATTCGGGC AAGCGCCCCC TGATGGGCGC GGCCGCGGCG GCGGCGGCGG ATGTGGTCTT CGTGACCGAT GACAATCCCC GCTCCGAAGA CCCCGCGCTG ATCCGGGCGC AGGTGCGGGC GGGCTGTCCC GAGGCCACGG ATGTGCCGGA CCGGGCGGAG GCGATCCTGC GCGGGGTCGA CGCGCTGGAG CCGGGTGACG TTCTGCTGAT CGCGGGCAAG GGGCACGAGA CGGGGCAGAC GGTGGGCGAC GTGGTCTACC CGTTCGACGA CGCGGAACAG GCCAGCGTGG CGGTCGCGGC GCTCGAAGGG CGGCTGGCAT GA
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Protein sequence | MSVGYGPKSL AELGFAERGR PVTGLALDSR QVKEGYLFAG LPGSRVHGAE FIQYALRMGA GAILTDAEGA RIARDVLDGA EVTLIVAEDP RQAFSAAAAL WYGAQPATMV GVTGTNGKTS VASFTRQLWQ GLGHAAANIG TTGIEGDFSA DLAHTTPDPL TLHAALAEMA AQGITHAAME ASSHGLDQRR LDGVRLVAAG FTNFSQDHLD YHETFEAYFA AKAGLFSRVL ADQGMAVINL DDPKGADMMA IAHGAGAELL TVGTHKDAML RLTAQRFDAD GQEMRFTWKG VAHQARLNLV GGFQASNVLV AMGLVMATGA QVGDLVPLLP RLATVRGRMQ KVARRENGAT VFVDYAHTPD ALKTALRALR PHVLGRLVVV FGAGGDRDSG KRPLMGAAAA AAADVVFVTD DNPRSEDPAL IRAQVRAGCP EATDVPDRAE AILRGVDALE PGDVLLIAGK GHETGQTVGD VVYPFDDAEQ ASVAVAALEG RLA
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