Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2351 |
Symbol | |
ID | 5714006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2483895 |
End bp | 2484884 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641268275 |
Product | hypothetical protein |
Protein accession | YP_001533688 |
Protein GI | 159044894 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.92954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.47129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATAT CGCACGATCA GATGCCCGAG CAGGCACTGG CCTGGCACCG GCAGGGCAAG GGTGCCGTGA TCGCCACGGT GGTGGAGACC TGGGGCTCCG CGCCGCGCCC CATCGGGAGC CAGCTGGTGA TCTCGGGGGA GGCTGAATTG GCCGGGTCGG TCTCGGGCGG CTGTGTCGAA GGTGCGGTGG TGGCCGAGGC CCTCGACGCC ATCGAGAGCG GCAAGGCCAG TTCCATGACC TTCGGGGTCA GCGACGACGA GGCCTTTGCC GTCGGGCTCG CCTGTGGTGG GCAGATTCGC GTGATCGTCG AACCGGTGGG GCCACATGTT TCCGAGGACA TGCTGGCCGA CCTGGTCGCG GCCCGCGCCG CCCGGGCCCC GGTCGCGCTG GCGGTGAACC CGGACACGTG GGAGCGACGC CTTGTCCGCC CGGACACCGA TGATCCGCTG TGCCCGGCGC TGATGTCGCG GGCACGGGCG GACAAGTCCG GTTTCGAAGG CGACTGGTTT CTCGGGCTGC ATAATCCGCC CCTGCGCATG GTGGTGGTGG GGGCCGTACA TATCGCCCAG CCCTTGCTGG CCATGGCGCG GCTGGCGGGG TATGATCCGG TCCTCGTCGA TCCGCGGGCG GCCTTCGGCT CGGAGGCGCG CTTTCCCGGC GAGACGATCC TCGACGAATG GCCGGATGCC GCATTGAAGG CGCATGGGCT CGACGCGCGC ACGGCGGTGG TCACCCTGAC CCATGATCCC AAGCTGGACG ATCCGGCCAT CGAGGTTGCG CTTGGCGCGC CGTGTTTCTA CCTCGGCTGT CTCGGATCGA CGCGGACCCA CGCCAAACGG GTCGCGCGCT TGCAGGAGGC CGGGTTCGAC GAGGCCGCGA TCGCGCGCAT CCACGCGCCC GTGGGTCTCG ACATCGGGGC AAAATCGCCC GCCGAGATCG CCATATCGAT CATGGCCGAA ATCACGGACC GGCTGCGGAA GGCGCCATGA
|
Protein sequence | MTISHDQMPE QALAWHRQGK GAVIATVVET WGSAPRPIGS QLVISGEAEL AGSVSGGCVE GAVVAEALDA IESGKASSMT FGVSDDEAFA VGLACGGQIR VIVEPVGPHV SEDMLADLVA ARAARAPVAL AVNPDTWERR LVRPDTDDPL CPALMSRARA DKSGFEGDWF LGLHNPPLRM VVVGAVHIAQ PLLAMARLAG YDPVLVDPRA AFGSEARFPG ETILDEWPDA ALKAHGLDAR TAVVTLTHDP KLDDPAIEVA LGAPCFYLGC LGSTRTHAKR VARLQEAGFD EAAIARIHAP VGLDIGAKSP AEIAISIMAE ITDRLRKAP
|
| |