Gene Dshi_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_2329 
Symbol 
ID5713984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand+ 
Start bp2459914 
End bp2460507 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID641268253 
Producthypothetical protein 
Protein accessionYP_001533666 
Protein GI159044872 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000000218448 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.931598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATC CCCTCAAATC CTCCCTCGCC GCCTGCGTCC TGGCCCTTGC CACATCCGTT 
TCGGCCCCCG CACACGCGCA GGAGGCCTAC CTCGGACAGA TCATCATGGG CGGATGGAAC 
TTCTGTCCGC GCGGAACCGC GCCACTCAAC GGACAACTGA TCCAGATCAG CCAGAACTCT 
GCCCTGTTCT CCCTGCTGGG CACGCAATTC GGCGGGGACG GGCGCACGAC CTTCGCCCTG 
CCCGACATGC GCGGCCGGGT GGCCCTGCAC AACGGAACCG GGCCGGGCCT GACCAACAAG 
CGCATCGGCG CCCGGGGCGG CAGCGAAACC AACACGCTGA CCGTCGACCA ACTGCCCCCA 
CACGCCCACG CGCTGACAGG CACAAGCACG GCTGCCAATA CCCCCTCGCC CGCCGGTGCC 
CTGCCCGCCA CGACGGGGCG CGATTCCAGC TATGCCGCCG GCAGCGCCGA CACCGGGATG 
GGCGCGGGCG CGATCGGCAG TACCGGCGCC GGACAACCGG TCAACAACAT GCCGCCCTAT 
ACCGTGGTGC AGATGTGCAT CGTGACACAG GGCCTGTTCC CCTCGCGCAG CTAG
 
Protein sequence
MFNPLKSSLA ACVLALATSV SAPAHAQEAY LGQIIMGGWN FCPRGTAPLN GQLIQISQNS 
ALFSLLGTQF GGDGRTTFAL PDMRGRVALH NGTGPGLTNK RIGARGGSET NTLTVDQLPP 
HAHALTGTST AANTPSPAGA LPATTGRDSS YAAGSADTGM GAGAIGSTGA GQPVNNMPPY 
TVVQMCIVTQ GLFPSRS