| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_2296 |
|---|
| Symbol | |
|---|
| ID | 5713950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 2427999 |
|---|
| End bp | 2428427 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641268219 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001533633 |
|---|
| Protein GI | 159044839 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAG AGGGAGGCCG CACCGAATGC GGCATGAACA CCAAGCTGCA CGCCATCTGC
GACAGACAAG GACGCCCGCT GAACCTGTTC GTGACCGCTG GCCAGGTCAG CGACTATATC
GGCGCACGAG CATTGCTGAG TAGCCTGCCG GATGTCGACT GGCTGCTCGG GGACCGCGGA
TATGATGCCG ACTGGTTTCG AGAAGCGTTA GAGGACAAAG GGATACGCGC CTGCATCCCT
GGTCGGAAGC AACGGAAGAA GACCGTCAAA TACGACAAGC GTCGCTACAA ACGACGCAAC
CGGATCGAAA TCATGTTCGG TAAATTGAAG GATTGGCGGC GTGTGCCAAC CCGCTACGAC
AGGTGCCCGA AGGTCTTCCT ATCAGCCGTC GCCCTCGCAG CAACCTCATT TATTGGCTAT
GAGGCCTGA
|
|---|
| Protein sequence | MSREGGRTEC GMNTKLHAIC DRQGRPLNLF VTAGQVSDYI GARALLSSLP DVDWLLGDRG
YDADWFREAL EDKGIRACIP GRKQRKKTVK YDKRRYKRRN RIEIMFGKLK DWRRVPTRYD
RCPKVFLSAV ALAATSFIGY EA
|
|---|
| |