Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_2295 |
Symbol | |
ID | 5713949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 2426408 |
End bp | 2427880 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641268218 |
Product | putative amidohydrolase |
Protein accession | YP_001533632 |
Protein GI | 159044838 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC AAACGACAGT ACTTCTCGGT ACCGCGGTGT CCGCGCTCGT TGCCGTCCAA GCACTGGCGC AGGATATTCC TTCGGAAGTG ACGCTGTTCA AGGATGTGAA CATCTTCGAC GGCAAGAATG ACGCGCTTCT CGAGGGGTAT GATGTCCTCG TAGTCCGGAA CCTGATCCAG CAGATCGCCG AGGATATCCC CGTCTCGGGC ACCTATGAGC TTGAAGTGAG CACTGGTGCG CTGGAGCGCG TCGAGACCCT GCCGGGATCG GGCGTCAACG GCTACTCGAT CACGATCCGC GATGCGGACG GTGTCGAGAC ACAGACACAG CAGGTCGCTG TCAACGTGAT TGCGGGCGGC GGCAGAACCC TGATGCCGGG CCTGATCGAC GCGCATTATC ACCTGATGCT CGCGGCCAGC CAGGGGGATA GCTGGCGCCT CGAGCAACCC GATTACACCC ATGCAACCAT GGTGGTCGAG GCTAACAACC TGCTGCAGCG CGGGTTCACA TCTATCCGCG ATACGGCTGG TCCGGGCTTC GGCATCAAGA AGGCGGTCGA CGAAGGGATG ATCCCCGGCC CACGGATGTA CCTGTCCGGC ACGCTCATCA CCCAGACCTC CGGACACGCA GACCGCACCC TGCCTTTCGA GGAGCCCCGC ATCTTCAGCG GCCGCGCGCC CGTGGGTGAG GAAGTGATGA AGCTCGACCG GGTGGTGAAC GGTCGGGACG AGGTGCTGGC GGCAACGCGC CAGAACCTCA AGCAAGGCGC AACGCAGATC AAGATCGCCA TCGGCGGCGG TGTCTATTCG CTCTACGATC CGCTGGACGT GACGGAGTTC ACCGAGGACG AAATCCGGGC GGCTGTCGAT GCCGCGTCGG ACTGGGGCAC CTATGTCACC GCTCACGTCT ACACGCCCAA GGGAGTCCTG CGCGGCATAA GGAACGGTTT GAAGACCATC GAGCACGGCC AGTTGATGGA CGAAGAAGCC GCCCGCGAAA TGGCTGAGCG TGGCGTCTAC CTCATCACCC AGCCCTTCGA GGCCGAGGAA AACCTGCGCG CGCTCGCCAA CGACATCCAG TGGGCCAAGT ACCTGCAAGT CGTCGAAGGC TGGCAGCGCA CCGCCGACCT GGTCAAGCAA TACGATATCA AGATGGGCTT CGGCACGGAC TTGGTCTTTG CGCCGGATAC CAACGGGCAG CAGGCCGACT TCCTGGCGCG TTTCGGCAAA TGGTTCAGCA ATATCGAGAT GCTGCGCATG ATCACTTCGA CCAATGCCGA GATCCTGGCG CTTAGCGGTC CGCGCAACCC GTATCAGGAG GGCCCGCTCG GTGTGATCGA GGAAGGCGCC TACGCGGACA TAATCCTCGT GGACGGCAAT CCGCTGGAGG ATGTCTCCAT CCTCGGCAGC AACGGCGCGA ACATCCCGCT GGTCATGAAG GACGGCCGGA TCTTCAAGAA CACGATGAAC TGA
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Protein sequence | MKVQTTVLLG TAVSALVAVQ ALAQDIPSEV TLFKDVNIFD GKNDALLEGY DVLVVRNLIQ QIAEDIPVSG TYELEVSTGA LERVETLPGS GVNGYSITIR DADGVETQTQ QVAVNVIAGG GRTLMPGLID AHYHLMLAAS QGDSWRLEQP DYTHATMVVE ANNLLQRGFT SIRDTAGPGF GIKKAVDEGM IPGPRMYLSG TLITQTSGHA DRTLPFEEPR IFSGRAPVGE EVMKLDRVVN GRDEVLAATR QNLKQGATQI KIAIGGGVYS LYDPLDVTEF TEDEIRAAVD AASDWGTYVT AHVYTPKGVL RGIRNGLKTI EHGQLMDEEA AREMAERGVY LITQPFEAEE NLRALANDIQ WAKYLQVVEG WQRTADLVKQ YDIKMGFGTD LVFAPDTNGQ QADFLARFGK WFSNIEMLRM ITSTNAEILA LSGPRNPYQE GPLGVIEEGA YADIILVDGN PLEDVSILGS NGANIPLVMK DGRIFKNTMN
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